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  5. GSVIVT01009680001

GSVIVT01009680001


Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor


Gene families : OG0000265 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000265_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009680001

Target Alias Description ECC score Gene Family Method Actions
AT2G01940 ATIDD15, SGR5 C2H2-like zinc finger protein 0.03 OrthoFinder output from all 47 species
Adi_g008986 MGP C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g20838 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ceric.08G030600.1 IDD2, AtIDD2,... C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Dac_g17016 IDD2, AtIDD2 C2H2 subclass IDD transcription factor & original... 0.04 OrthoFinder output from all 47 species
Dcu_g03862 IDD16, AtIDD16 C2H2 subclass IDD transcription factor & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01003119001 AtIDD12, IDD12 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.04 OrthoFinder output from all 47 species
GSVIVT01031112001 IDD2, AtIDD2 RNA biosynthesis.transcriptional activation.C2H2 zinc... 0.08 OrthoFinder output from all 47 species
LOC_Os07g39310.1 MGP, LOC_Os07g39310 C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Pnu_g12982 IDD14, AtIDD14 C2H2 subclass IDD transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0025.g009246 JKD C2H2 subclass IDD transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc06g062670.3.1 AtIDD7, IDD7,... C2H2 zinc finger transcription factor 0.04 OrthoFinder output from all 47 species
Solyc06g075250.3.1 JKD, Solyc06g075250 C2H2 zinc finger transcription factor 0.05 OrthoFinder output from all 47 species
Zm00001e038625_P001 IDD16, AtIDD16,... C2H2 zinc finger transcription factor 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!