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  5. GSVIVT01009662001

GSVIVT01009662001


Description : Protein degradation.peptidase families.cysteine-type peptidase activities.PPPDE-type peptidase


Gene families : OG0000778 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000778_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009662001
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00080300 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.cysteine-type... 0.05 OrthoFinder output from all 47 species
Adi_g081331 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05838 No alias deubiquitinase & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0139.g051213 No alias deubiquitinase & original description: CDS=368-799 0.03 OrthoFinder output from all 47 species
Gb_01399 No alias peptidase (PPPDE) 0.07 OrthoFinder output from all 47 species
Lfl_g25771 No alias deubiquitinase & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g109430.3.1 Solyc01g109430 peptidase (PPPDE) 0.06 OrthoFinder output from all 47 species
Spa_g56256 No alias deubiquitinase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000776_P001 Zm00001e000776 peptidase (PPPDE) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR008580 PPPDE_dom 42 176
No external refs found!