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  5. GSVIVT01009427001

GSVIVT01009427001


Description : Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana


Gene families : OG0003676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003676_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009427001
Cluster HCCA: Cluster_67

Target Alias Description ECC score Gene Family Method Actions
AT3G53010 No alias Domain of unknown function (DUF303) 0.03 OrthoFinder output from all 47 species
Dac_g11673 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g18472 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os03g64050.1 LOC_Os03g64050 Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc01g102330.3.1 Solyc01g102330 Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc04g078430.3.1 Solyc04g078430 Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc04g078440.4.1 Solyc04g078440 Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc06g073240.3.1 Solyc06g073240 Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc07g021510.3.1 Solyc07g021510 Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e033439_P001 Zm00001e033439 Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
InterPro domains Description Start Stop
IPR005181 SASA 1 218
No external refs found!