GSVIVT01009272001 (ATXYN1, RXF12)

Aliases : ATXYN1, RXF12

Description : Cell wall.hemicellulose.xylan.modification and degradation.endo-beta-1,4-xylanase

Gene families : OG0001478 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001478_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01009272001

Target	Alias	Description	ECC score	Gene Family Method
Ehy_g19685	ATXYN1, RXF12	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26905	ATXYN1, RXF12	endo-beta-1,4-xylanase & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g09327	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Smo111304	ATXYN1, RXF12	Cell wall.hemicellulose.xylan.modification and...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEA	Interproscan
BP	GO:0005975	carbohydrate metabolic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003305	CenC_carb-bd	59	199
IPR003305	CenC_carb-bd	404	547
IPR003305	CenC_carb-bd	233	369
IPR001000	GH10_dom	604	841

External Links

No external refs found!