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  5. GSVIVT01009190001

GSVIVT01009190001 (ATRGTA1, RGTA1)


Aliases : ATRGTA1, RGTA1

Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase membrane association.RAB-GTPase geranylgeranyltransferase (RGT) complex.alpha subunit


Gene families : OG0004280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009190001

Target Alias Description ECC score Gene Family Method Actions
AT4G24490 ATRGTA1, RGTA1 RAB geranylgeranyl transferase alpha subunit 1 0.03 OrthoFinder output from all 47 species
Ceric.01G053200.1 ATRGTA1, RGTA1,... EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Dac_g01605 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
Dcu_g03999 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.09 OrthoFinder output from all 47 species
LOC_Os06g46380.1 RGTA2, ATRGTA2,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.03 OrthoFinder output from all 47 species
Lfl_g06062 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.03 OrthoFinder output from all 47 species
MA_9175507g0010 ATRGTA1, RGTA1 subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.01 OrthoFinder output from all 47 species
Msp_g11677 ATRGTA1, RGTA1 EC_2.5 transferase transferring alkyl or aryl group,... 0.04 OrthoFinder output from all 47 species
Solyc04g076430.3.1 ATRGTA1, RGTA1,... subunit alpha of RAB-GTPase geranylgeranyltransferase... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008318 protein prenyltransferase activity IEA Interproscan
BP GO:0018342 protein prenylation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP HCCA
CC GO:0000145 exocyst IEP HCCA
CC GO:0000221 vacuolar proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019829 ATPase-coupled monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP HCCA
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP HCCA
CC GO:0033180 proton-transporting V-type ATPase, V1 domain IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0042625 ATPase-coupled ion transmembrane transporter activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
MF GO:0120227 acyl-CoA binding IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901567 fatty acid derivative binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR002088 Prenyl_trans_a 160 187
IPR002088 Prenyl_trans_a 45 71
IPR002088 Prenyl_trans_a 90 117
IPR002088 Prenyl_trans_a 125 149
IPR002088 Prenyl_trans_a 206 233
No external refs found!