GSVIVT01009175001 (MSL3)

Aliases : MSL3

Description : Solute transport.channels.MSL mechanosensitive ion channel

Gene families : OG0003040 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003040_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01009175001
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AT1G58200	MSL3	MSCS-like 3	0.04	OrthoFinder output from all 47 species
Ceric.12G093100.1	MSL2, Ceric.12G093100	mechanosensitive ion channel *(MSL) & original...	0.02	OrthoFinder output from all 47 species
Solyc04g076300.4.1	MSL3, Solyc04g076300	mechanosensitive ion channel (MSL)	0.03	OrthoFinder output from all 47 species
Zm00001e002087_P001	MSL2, Zm00001e002087	mechanosensitive ion channel (MSL)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	HCCA
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	IEP	HCCA
MF	GO:0033926	glycopeptide alpha-N-acetylgalactosaminidase activity	IEP	HCCA
MF	GO:0140103	catalytic activity, acting on a glycoprotein	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006685	MscS_channel	239	446

External Links

No external refs found!