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  5. GSVIVT01009071001

GSVIVT01009071001


Description : RNA biosynthesis.transcriptional activation.JUMONJI transcription factor


Gene families : OG0001583 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001583_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009071001

Target Alias Description ECC score Gene Family Method Actions
AT1G78280 No alias transferases, transferring glycosyl groups 0.05 OrthoFinder output from all 47 species
Ceric.27G069900.1 Ceric.27G069900 histone demethylase *(JMJD6) & original description:... 0.02 OrthoFinder output from all 47 species
Cre07.g327150 No alias RNA biosynthesis.transcriptional activation.JUMONJI... 0.02 OrthoFinder output from all 47 species
Pir_g60700 No alias histone demethylase *(JMJD6) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g15658 No alias histone demethylase *(JMJD6) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g074490.3.1 Solyc04g074490 transcription factor (JUMONJI) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 25 68
No external refs found!