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Aliases : TT1, WIP1
Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0001814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001814_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01009046001 | |
| Cluster | HCCA: Cluster_78 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00022p00243980 | WIP2, NTT,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00093p00164790 | WIP6, DOT5,... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00114p00100630 | WIP3,... | Zinc finger protein WIP3 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| AT1G08290 | WIP3 | WIP domain protein 3 | 0.04 | OrthoFinder output from all 47 species | |
| AT1G34790 | TT1, WIP1 | C2H2 and C2HC zinc fingers superfamily protein | 0.06 | OrthoFinder output from all 47 species | |
| Aev_g05354 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g26211 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.06 | OrthoFinder output from all 47 species | |
| Aob_g27587 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene00894.t1 | WIP2, NTT,... | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Aspi01Gene04309.t1 | WIP2, NTT,... | C2H2 subclass WIP transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0011.g012566 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Dcu_g06863 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g19701 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01033329001 | WIP2, NTT | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os05g37190.1 | WIP5, LOC_Os05g37190 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os06g40960.1 | WIP2, NTT, LOC_Os06g40960 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os09g10980.1 | WIP5, LOC_Os09g10980 | C2H2 zinc finger transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| LOC_Os09g31140.1 | WIP2, NTT, LOC_Os09g31140 | C2H2 zinc finger transcription factor | 0.05 | OrthoFinder output from all 47 species | |
| Len_g56482 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g15647 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_3555g0010 | WIP6, DOT5 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g58693 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g12905 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.05 | OrthoFinder output from all 47 species | |
| Ppi_g11963 | WIP2, NTT | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g05192 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Solyc03g059270.4.1 | WIP2, NTT, Solyc03g059270 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g074360.4.1 | WIP3, Solyc06g074360 | C2H2 zinc finger transcription factor | 0.07 | OrthoFinder output from all 47 species | |
| Spa_g15966 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g20999 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g57335 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g14883 | WIP5 | C2H2 subclass WIP transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e009663_P001 | WIP6, DOT5,... | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e024373_P001 | WIP2, NTT, Zm00001e024373 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e026959_P001 | WIP5, Zm00001e026959 | C2H2 zinc finger transcription factor | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e031762_P001 | WIP4, Zm00001e031762 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0005506 | iron ion binding | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006631 | fatty acid metabolic process | IEP | HCCA |
| BP | GO:0006633 | fatty acid biosynthetic process | IEP | HCCA |
| MF | GO:0008519 | ammonium transmembrane transporter activity | IEP | HCCA |
| MF | GO:0015299 | obsolete solute:proton antiporter activity | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016705 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0045229 | external encapsulating structure organization | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| MF | GO:0052689 | carboxylic ester hydrolase activity | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | HCCA |
| BP | GO:0071555 | cell wall organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| BP | GO:0072330 | monocarboxylic acid biosynthetic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |