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Description : RNA biosynthesis.transcriptional activation.C2H2 zinc finger transcription factor
Gene families : OG0001550 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001550_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01008925001 | |
| Cluster | HCCA: Cluster_58 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00088p00164330 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.04 | OrthoFinder output from all 47 species | |
| AMTR_s00199p00026650 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| AT5G54630 | No alias | zinc finger protein-related | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g16997 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene16934.t1 | Aspi01Gene16934 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0305.g063895 | No alias | not classified & original description: CDS=1048-1284 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G048600.1 | Ceric.39G048600 | not classified & original description: pacid=50582455... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024778001 | No alias | RNA biosynthesis.transcriptional activation.C2H2 zinc... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25842 | No alias | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Gb_30270 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32332 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Gb_32897 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g57650.1 | LOC_Os01g57650 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os03g15790.1 | LOC_Os03g15790 | C2H2 zinc finger transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g59380.1 | LOC_Os04g59380 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Len_g01208 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10426153g0010 | No alias | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_525155g0010 | No alias | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g13834 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g04292 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g27885 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g11728 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g26086 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g13508 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0089.g018625 | No alias | not classified & original description: CDS=1-1434 | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g081370.2.1 | Solyc04g081370 | C2H2 zinc finger transcription factor | 0.04 | OrthoFinder output from all 47 species | |
| Solyc06g076820.1.1 | Solyc06g076820 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g18941 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g50745 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g50839 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g07821 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e008786_P002 | Zm00001e008786 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e019606_P002 | Zm00001e019606 | C2H2 zinc finger transcription factor | 0.06 | OrthoFinder output from all 47 species | |
| Zm00001e028937_P001 | Zm00001e028937 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e040454_P002 | Zm00001e040454 | C2H2 zinc finger transcription factor | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| BP | GO:0006835 | dicarboxylic acid transport | IEP | HCCA |
| MF | GO:0008270 | zinc ion binding | IEP | HCCA |
| BP | GO:0015711 | organic anion transport | IEP | HCCA |
| BP | GO:0015740 | C4-dicarboxylate transport | IEP | HCCA |
| BP | GO:0015743 | malate transport | IEP | HCCA |
| BP | GO:0015849 | organic acid transport | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| BP | GO:0046942 | carboxylic acid transport | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |