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  5. GSVIVT01008778001

GSVIVT01008778001


Description : Cell cycle.organelle machineries.DNA replication.DNA primase and helicase TWINKLE


Gene families : OG0002154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002154_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008778001

Target Alias Description ECC score Gene Family Method Actions
Aev_g01337 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g11567 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14823 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09763 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69210.t1 Aspi01Gene69210 DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007473 No alias DNA primase and helicase *(TWINKLE) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g17545 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os06g45980.1 LOC_Os06g45980 DNA primase and helicase (TWINKLE) 0.04 OrthoFinder output from all 47 species
MA_21134g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Nbi_g14748 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g40063 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g57752 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g08975 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.04 OrthoFinder output from all 47 species
Smo164801 No alias Cell cycle.organelle machineries.DNA replication.DNA... 0.06 OrthoFinder output from all 47 species
Solyc02g022830.3.1 Solyc02g022830 DNA primase and helicase (TWINKLE) 0.06 OrthoFinder output from all 47 species
Spa_g51689 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g08851 No alias DNA primase and helicase *(TWINKLE) & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e030349_P002 Zm00001e030349 DNA primase and helicase (TWINKLE) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0009982 pseudouridine synthase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016853 isomerase activity IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR006171 TOPRIM_domain 285 376
No external refs found!