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  5. GSVIVT01008674001

GSVIVT01008674001


Description : Pentatricopeptide repeat-containing protein At1g76280 OS=Arabidopsis thaliana


Gene families : OG0007936 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007936_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008674001

Target Alias Description ECC score Gene Family Method Actions
Ceric.1Z004000.1 Ceric.1Z004000 not classified & original description: pacid=50628117... 0.03 OrthoFinder output from all 47 species
LOC_Os09g29790.1 LOC_Os09g29790 Pentatricopeptide repeat-containing protein At1g76280... 0.03 OrthoFinder output from all 47 species
Mp7g13850.1 No alias Pentatricopeptide repeat-containing protein At1g76280... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007064 mitotic sister chromatid cohesion IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1903047 mitotic cell cycle process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 134 151
IPR002885 Pentatricopeptide_repeat 554 597
IPR002885 Pentatricopeptide_repeat 644 697
IPR002885 Pentatricopeptide_repeat 432 477
IPR002885 Pentatricopeptide_repeat 333 374
No external refs found!