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  5. GSVIVT01008653001

GSVIVT01008653001 (VIM1, ORTH2)


Aliases : VIM1, ORTH2

Description : E3 ubiquitin-protein ligase ORTHRUS 2 OS=Arabidopsis thaliana


Gene families : OG0003058 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003058_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008653001
Cluster HCCA: Cluster_34

Target Alias Description ECC score Gene Family Method Actions
AT1G66050 VIM2, ORTH5 Zinc finger (C3HC4-type RING finger) family protein 0.03 OrthoFinder output from all 47 species
Lfl_g23711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003105 SRA_YDG 11 73
No external refs found!