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  5. GSVIVT01008618001

GSVIVT01008618001


Description : CASP-like protein 1F1 OS=Vitis vinifera


Gene families : OG0001933 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001933_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008618001
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00265970 evm_27.TU.AmTr_v1... Casparian strip membrane protein 3 OS=Sorghum bicolor 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00176090 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.04 OrthoFinder output from all 47 species
AMTR_s00016p00177260 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Ricinus communis 0.02 OrthoFinder output from all 47 species
AMTR_s00016p00177940 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00178190 evm_27.TU.AmTr_v1... CASP-like protein 1F1 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
AMTR_s00057p00159510 evm_27.TU.AmTr_v1... CASP-like protein 1D1 OS=Ricinus communis 0.02 OrthoFinder output from all 47 species
AMTR_s00092p00142720 evm_27.TU.AmTr_v1... CASP-like protein 1B2 OS=Populus trichocarpa 0.03 OrthoFinder output from all 47 species
AT1G03700 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT2G27370 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT2G36100 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT3G06390 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT3G11550 No alias Uncharacterised protein family (UPF0497) 0.05 OrthoFinder output from all 47 species
AT4G03540 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT4G15620 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT4G20390 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT5G06200 No alias Uncharacterised protein family (UPF0497) 0.04 OrthoFinder output from all 47 species
AT5G15290 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
AT5G44550 No alias Uncharacterised protein family (UPF0497) 0.03 OrthoFinder output from all 47 species
GSVIVT01020544001 No alias CASP-like protein 1C2 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
GSVIVT01036085001 No alias Casparian strip membrane protein 2 OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
GSVIVT01037957001 No alias CASP-like protein 1B2 OS=Vitis vinifera 0.04 OrthoFinder output from all 47 species
Gb_11696 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.06 OrthoFinder output from all 47 species
Gb_11697 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 OrthoFinder output from all 47 species
Gb_26811 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Gb_26813 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
Gb_40900 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.02 OrthoFinder output from all 47 species
LOC_Os02g36845.1 LOC_Os02g36845 Casparian strip membrane protein 7 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
LOC_Os02g51010.1 LOC_Os02g51010 Casparian strip membrane protein 4 OS=Oryza sativa... 0.01 OrthoFinder output from all 47 species
LOC_Os04g38690.1 LOC_Os04g38690 Casparian strip membrane protein 1 OS=Oryza rufipogon... 0.05 OrthoFinder output from all 47 species
LOC_Os04g58760.1 LOC_Os04g58760 Casparian strip membrane protein 1 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
LOC_Os05g15630.1 LOC_Os05g15630 CASP-like protein BLE3 OS=Oryza sativa subsp. indica... 0.04 OrthoFinder output from all 47 species
LOC_Os06g12500.1 LOC_Os06g12500 Casparian strip membrane protein 3 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
MA_3155878g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_5227376g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.03 OrthoFinder output from all 47 species
MA_5618864g0010 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.05 OrthoFinder output from all 47 species
MA_64798g0010 No alias Casparian strip membrane protein 1 OS=Picea glauca... 0.04 OrthoFinder output from all 47 species
MA_67384g0020 No alias CASP-like protein 1U1 OS=Picea sitchensis... 0.04 OrthoFinder output from all 47 species
MA_93690g0010 No alias Casparian strip membrane protein 1 OS=Pinus taeda... 0.03 OrthoFinder output from all 47 species
Pir_g23305 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g069730.3.1 Solyc02g069730 CASP-like protein 1B1 OS=Ricinus communis... 0.04 OrthoFinder output from all 47 species
Solyc04g005620.3.1 Solyc04g005620 Casparian strip membrane protein 2 OS=Solanum demissum... 0.06 OrthoFinder output from all 47 species
Solyc06g074230.3.1 Solyc06g074230 Casparian strip membrane protein 2 OS=Triphysaria... 0.05 OrthoFinder output from all 47 species
Solyc09g010200.4.1 Solyc09g010200 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.05 OrthoFinder output from all 47 species
Solyc09g074550.3.1 Solyc09g074550 CASP-like protein 1E1 OS=Glycine max... 0.02 OrthoFinder output from all 47 species
Solyc10g083250.2.1 Solyc10g083250 Casparian strip membrane protein 1 OS=Nicotiana tabacum... 0.06 OrthoFinder output from all 47 species
Zm00001e003216_P001 Zm00001e003216 CASP-like protein 1B1 OS=Zea mays (sp|b6tuh4|cspl2_maize : 130.0) 0.03 OrthoFinder output from all 47 species
Zm00001e006491_P001 Zm00001e006491 Casparian strip membrane protein 2 OS=Zea mays... 0.04 OrthoFinder output from all 47 species
Zm00001e015806_P001 Zm00001e015806 Casparian strip membrane protein 3 OS=Sorghum bicolor... 0.03 OrthoFinder output from all 47 species
Zm00001e017631_P001 Zm00001e017631 CASP-like protein 1E1 OS=Zea mays (sp|b4fap1|cspl4_maize : 254.0) 0.04 OrthoFinder output from all 47 species
Zm00001e024279_P001 Zm00001e024279 Casparian strip membrane protein 2 OS=Sorghum bicolor... 0.03 OrthoFinder output from all 47 species
Zm00001e026902_P001 Zm00001e026902 CASP-like protein 1C2 OS=Zea mays (sp|b6szu6|cspl5_maize : 227.0) 0.05 OrthoFinder output from all 47 species
Zm00001e036094_P001 Zm00001e036094 Casparian strip membrane protein 1 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006702 CASP_dom 48 189
No external refs found!