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  5. GSVIVT01008295001

GSVIVT01008295001 (CPN21, ATCPN21,...)


Aliases : CPN21, ATCPN21, CHCPN10, CPN10, CPN20

Description : External stimuli response.temperature.Hsp (heat-shock-responsive protein) families.Hsp60 family.Hsp20 Hsp60-co-chaperone


Gene families : OG0002061 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002061_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008295001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT5G20720 CPN21, ATCPN21,... chaperonin 20 0.08 OrthoFinder output from all 47 species
Aop_g00303 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0111.g045586 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: CDS=141-902 0.03 OrthoFinder output from all 47 species
Cba_g00610 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06263 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Cre08.g358562 CPN21, ATCPN21,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
Cre12.g505850 CPN21, ATCPN21,... External stimuli response.temperature.Hsp... 0.04 OrthoFinder output from all 47 species
Ehy_g02104 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_18360 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 OrthoFinder output from all 47 species
LOC_Os02g54060.1 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.03 OrthoFinder output from all 47 species
LOC_Os06g09679.1 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 OrthoFinder output from all 47 species
Lfl_g09535 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10430161g0010 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.03 OrthoFinder output from all 47 species
MA_31325g0010 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.02 OrthoFinder output from all 47 species
Mp1g10690.1 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.05 OrthoFinder output from all 47 species
Msp_g11708 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g06096 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g24990 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g13632 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g19651 No alias Hsp60-co-chaperone *(Hsp20) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g042250.3.1 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.06 OrthoFinder output from all 47 species
Tin_g11622 CPN21, ATCPN21,... Hsp60-co-chaperone *(Hsp20) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009881_P001 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.11 OrthoFinder output from all 47 species
Zm00001e036248_P001 CPN21, ATCPN21,... CPN20 auxiliary co-chaperone involved in RuBisCo... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006457 protein folding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006553 lysine metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0008839 4-hydroxy-tetrahydrodipicolinate reductase IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009085 lysine biosynthetic process IEP HCCA
BP GO:0009089 lysine biosynthetic process via diaminopimelate IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016597 amino acid binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043648 dicarboxylic acid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046451 diaminopimelate metabolic process IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR020818 Chaperonin_GroES 158 249
IPR020818 Chaperonin_GroES 60 149
No external refs found!