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  5. GSVIVT01008242001

GSVIVT01008242001 (ATHDA15, HDA15)


Aliases : ATHDA15, HDA15

Description : Chromatin organisation.histone modifications.histone deacetylation.HD1 histone deacetylase family.class-II histone deacetylase


Gene families : OG0001559 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001559_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008242001

Target Alias Description ECC score Gene Family Method Actions
AT5G61060 ATHDA5, HDA05, HDA5 histone deacetylase 5 0.02 OrthoFinder output from all 47 species
Aev_g18380 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g17859 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14691 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g65397 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0250.g060221 ATHDA15, HDA15 class-II histone deacetylase & original description: CDS=93-1925 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000093.133 ATHDA5, HDA05, HDA5 Histone deacetylase 5 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Ehy_g12704 ATHDA5, HDA05, HDA5 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os07g06980.1 ATHDA15, HDA15,... class-II histone deacetylase 0.03 OrthoFinder output from all 47 species
Lfl_g05654 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species
Mp1g20110.1 ATHDA15, HDA15 class-II histone deacetylase 0.05 OrthoFinder output from all 47 species
Pir_g10819 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17268 ATHDA15, HDA15 class-II histone deacetylase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003968 RNA-dependent RNA polymerase activity IEP HCCA
MF GO:0004371 glycerone kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007186 G protein-coupled receptor signaling pathway IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
MF GO:0031683 G-protein beta/gamma-subunit complex binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR023801 His_deacetylse_dom 314 603
No external refs found!