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  5. GSVIVT01008129001

GSVIVT01008129001 (IRX6, COBL4)


Aliases : IRX6, COBL4

Description : Cell wall.cellulose.synthesis.cellulose microfibrils and hemicellulose interaction.COB-type protein


Gene families : OG0000498 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000498_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008129001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00083860 COB,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 OrthoFinder output from all 47 species
AMTR_s00047p00216570 IRX6, COBL4,... Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.1 OrthoFinder output from all 47 species
AT1G09790 COBL6 COBRA-like protein 6 precursor 0.05 OrthoFinder output from all 47 species
AT5G15630 IRX6, COBL4 COBRA-like extracellular glycosyl-phosphatidyl... 0.26 OrthoFinder output from all 47 species
AT5G49270 COBL9, MRH4, SHV2, DER9 COBRA-like extracellular glycosyl-phosphatidyl... 0.04 OrthoFinder output from all 47 species
AT5G60920 COB COBRA-like extracellular glycosyl-phosphatidyl... 0.07 OrthoFinder output from all 47 species
Adi_g021950 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Adi_g082871 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Adi_g115193 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aev_g02340 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Aev_g17419 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Aev_g36598 IRX6, COBL4 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Ala_g14783 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Als_g00864 No alias regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Als_g04400 COBL11 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Als_g15085 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Als_g32496 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aob_g05189 COBL10 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Aob_g14283 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Aob_g19185 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Aob_g19904 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Aop_g04105 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Aop_g12365 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Aspi01Gene03097.t1 COBL1, Aspi01Gene03097 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene11127.t1 SEB1, COBL7,... regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene35118.t1 COBL2, Aspi01Gene35118 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Azfi_s0018.g014792 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Azfi_s0051.g031370 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Azfi_s0068.g036477 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Cba_g13589 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Ceric.16G001100.1 COB, Ceric.16G001100 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Ceric.25G025100.1 COBL2, Ceric.25G025100 regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Ceric.30G011700.1 SEB1, COBL7,... regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Ceric.33G061400.1 COB, Ceric.33G061400 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Dac_g00727 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Dac_g05120 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Dac_g14621 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Dac_g15805 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Dcu_g01030 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.12 OrthoFinder output from all 47 species
Dcu_g01570 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Dcu_g05573 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Dcu_g40673 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Dde_g26915 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Ehy_g05951 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Ehy_g12791 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
GSVIVT01008128001 COB Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.05 OrthoFinder output from all 47 species
GSVIVT01012641001 COBL10 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.07 OrthoFinder output from all 47 species
GSVIVT01036566001 COB Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.04 OrthoFinder output from all 47 species
Gb_25603 COBL1 COB cellulose microfibrils and hemicellulose interaction protein 0.06 OrthoFinder output from all 47 species
Gb_32178 SEB1, COBL7, ATSEB1 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Gb_36719 IRX6, COBL4 COB cellulose microfibrils and hemicellulose interaction protein 0.14 OrthoFinder output from all 47 species
Gb_36720 COB COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g18910.1 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g30250.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.16 OrthoFinder output from all 47 species
LOC_Os03g54750.1 COB, LOC_Os03g54750 COB cellulose microfibrils and hemicellulose interaction protein 0.09 OrthoFinder output from all 47 species
LOC_Os05g32110.1 COB, LOC_Os05g32110 COB cellulose microfibrils and hemicellulose interaction protein 0.13 OrthoFinder output from all 47 species
LOC_Os07g41320.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.06 OrthoFinder output from all 47 species
LOC_Os07g49080.1 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
Len_g16254 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.06 OrthoFinder output from all 47 species
Len_g43876 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Lfl_g07759 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Lfl_g28447 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
MA_106654g0010 COB COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
MA_124486g0010 COBL2 COB cellulose microfibrils and hemicellulose interaction protein 0.02 OrthoFinder output from all 47 species
MA_4056g0010 COB COB cellulose microfibrils and hemicellulose interaction protein 0.05 OrthoFinder output from all 47 species
MA_637485g0010 IRX6, COBL4 COB cellulose microfibrils and hemicellulose interaction protein 0.12 OrthoFinder output from all 47 species
MA_8714955g0010 COBL2 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Mp1g17600.1 COBL11 COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Mp7g06600.1 COBL1 COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Msp_g26241 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.09 OrthoFinder output from all 47 species
Nbi_g08845 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Nbi_g25499 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Ore_g28352 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.08 OrthoFinder output from all 47 species
Ore_g28453 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Ore_g34445 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Pir_g00548 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Pir_g11776 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Pir_g63488 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Pnu_g12421 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.05 OrthoFinder output from all 47 species
Pnu_g20839 COB regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Pp3c4_14561V3.1 Pp3c4_14561 No annotation 0.01 OrthoFinder output from all 47 species
Ppi_g06843 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Ppi_g06855 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021681 IRX6, COBL4 regulatory protein *(COB) of cellulose-hemicellulose... 0.04 OrthoFinder output from all 47 species
Smo271954 COBL1 Cell wall.cellulose.synthesis.cellulose microfibrils and... 0.09 OrthoFinder output from all 47 species
Solyc02g065765.1.1 COB, Solyc02g065765 COB cellulose microfibrils and hemicellulose interaction protein 0.06 OrthoFinder output from all 47 species
Solyc02g089130.4.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.16 OrthoFinder output from all 47 species
Solyc03g070440.4.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.19 OrthoFinder output from all 47 species
Solyc03g114880.3.1 IRX6, COBL4,... COBRA-like protein 4 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc03g114900.3.1 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.2 OrthoFinder output from all 47 species
Solyc03g114910.4.1 COB, Solyc03g114910 COB cellulose microfibrils and hemicellulose interaction protein 0.03 OrthoFinder output from all 47 species
Spa_g13676 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.13 OrthoFinder output from all 47 species
Spa_g24271 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.1 OrthoFinder output from all 47 species
Tin_g12012 SEB1, COBL7, ATSEB1 regulatory protein *(COB) of cellulose-hemicellulose... 0.02 OrthoFinder output from all 47 species
Tin_g12333 COBL1 regulatory protein *(COB) of cellulose-hemicellulose... 0.07 OrthoFinder output from all 47 species
Tin_g29852 COBL2 regulatory protein *(COB) of cellulose-hemicellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e001386_P001 SEB1, COBL7,... COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Zm00001e012022_P001 COB, Zm00001e012022 COB cellulose microfibrils and hemicellulose interaction protein 0.04 OrthoFinder output from all 47 species
Zm00001e035505_P001 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.14 OrthoFinder output from all 47 species
Zm00001e038043_P001 IRX6, COBL4,... COB cellulose microfibrils and hemicellulose interaction protein 0.26 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0010215 cellulose microfibril organization IEA Interproscan
BP GO:0016049 cell growth IEA Interproscan
CC GO:0031225 obsolete anchored component of membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0008064 regulation of actin polymerization or depolymerization IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
MF GO:0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity IEP HCCA
MF GO:0015020 glucuronosyltransferase activity IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016759 cellulose synthase activity IEP HCCA
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0030243 cellulose metabolic process IEP HCCA
BP GO:0030244 cellulose biosynthetic process IEP HCCA
BP GO:0030832 regulation of actin filament length IEP HCCA
BP GO:0030833 regulation of actin filament polymerization IEP HCCA
BP GO:0032271 regulation of protein polymerization IEP HCCA
BP GO:0032535 regulation of cellular component size IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0043254 regulation of protein-containing complex assembly IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044087 regulation of cellular component biogenesis IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0065008 regulation of biological quality IEP HCCA
BP GO:0090066 regulation of anatomical structure size IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR006918 COBRA_pln 566 729
IPR006918 COBRA_pln 70 233
No external refs found!