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Description : Cell wall.pectin.modification and degradation.pectate lyase
Gene families : OG0000492 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000492_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00004p00123190 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.09 | OrthoFinder output from all 47 species | |
| AMTR_s00039p00186640 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00078p00106380 | evm_27.TU.AmTr_v1... | Cell wall.pectin.modification and degradation.pectate lyase | 0.19 | OrthoFinder output from all 47 species | |
| AT1G14420 | AT59 | Pectate lyase family protein | 0.12 | OrthoFinder output from all 47 species | |
| AT1G67750 | No alias | Pectate lyase family protein | 0.03 | OrthoFinder output from all 47 species | |
| AT2G02720 | No alias | Pectate lyase family protein | 0.13 | OrthoFinder output from all 47 species | |
| AT3G01270 | No alias | Pectate lyase family protein | 0.07 | OrthoFinder output from all 47 species | |
| AT3G07010 | No alias | Pectin lyase-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G24230 | No alias | Pectate lyase family protein | 0.05 | OrthoFinder output from all 47 species | |
| AT3G24670 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G53190 | No alias | Pectin lyase-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| AT5G09280 | No alias | Pectin lyase-like superfamily protein | 0.05 | OrthoFinder output from all 47 species | |
| AT5G15110 | No alias | Pectate lyase family protein | 0.14 | OrthoFinder output from all 47 species | |
| AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G55720 | No alias | Pectin lyase-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT5G63180 | No alias | Pectin lyase-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| Adi_g013762 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g38995 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g27583 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g03233 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g13674 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g21580 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g63228 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0008.g011291 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=272-1573 | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0054.g033628 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: CDS=168-1388 | 0.04 | OrthoFinder output from all 47 species | |
| Azfi_s0123.g048430 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=163-1392 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.22G068000.1 | Ceric.22G068000 | EC_4.2 carbon-oxygen lyase & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.30G051100.1 | RHS14, Ceric.30G051100 | EC_4.2 carbon-oxygen lyase & original description:... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.30G051200.1 | RHS14, Ceric.30G051200 | EC_4.2 carbon-oxygen lyase & original description:... | 0.08 | OrthoFinder output from all 47 species | |
| Dac_g11741 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g12057 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dac_g39421 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g40377 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g46389 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ehy_g03656 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ehy_g05863 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g13542 | RHS14 | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g15970 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g31050 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01016209001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.01 | OrthoFinder output from all 47 species | |
| GSVIVT01028548001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01029048001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| Gb_19802 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os02g12300.1 | AT59, LOC_Os02g12300 | pectate lyase | 0.13 | OrthoFinder output from all 47 species | |
| LOC_Os04g05050.1 | LOC_Os04g05050 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os06g05209.1 | LOC_Os06g05209 | pectate lyase | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os06g05260.1 | LOC_Os06g05260 | pectate lyase | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os06g05272.1 | AT59, LOC_Os06g05272 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os06g38510.2 | LOC_Os06g38510 | pectate lyase | 0.12 | OrthoFinder output from all 47 species | |
| LOC_Os10g31910.1 | LOC_Os10g31910 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Len_g50589 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| MA_103716g0010 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| MA_10430145g0030 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_203992g0010 | No alias | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| MA_52869g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| MA_66914g0010 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Mp8g00770.1 | No alias | pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| Mp8g10190.1 | No alias | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g38292 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g01001 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g43436 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g26214 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g26215 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g28391 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g41164 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Ore_g41165 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g41450 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g27506 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g05797 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g06396 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g22126 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0006.g003136 | No alias | EC_4.2 carbon-oxygen lyase & original description: CDS=1-1299 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g03369 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Smo407495 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc01g010740.4.1 | AT59, Solyc01g010740 | pectate lyase | 0.02 | OrthoFinder output from all 47 species | |
| Solyc02g031960.3.1 | Solyc02g031960 | no hits & (original description: none) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g087670.3.1 | Solyc02g087670 | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| Solyc02g093580.4.1 | Solyc02g093580 | pectate lyase | 0.06 | OrthoFinder output from all 47 species | |
| Solyc03g058890.4.1 | AT59, Solyc03g058890 | pectate lyase | 0.13 | OrthoFinder output from all 47 species | |
| Solyc03g058910.3.1 | AT59, Solyc03g058910 | pectate lyase | 0.13 | OrthoFinder output from all 47 species | |
| Solyc03g111690.4.1 | Solyc03g111690 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Solyc03g113150.3.1 | AT59, Solyc03g113150 | pectate lyase | 0.05 | OrthoFinder output from all 47 species | |
| Solyc05g007080.4.1 | AT59, Solyc05g007080 | pectate lyase | 0.16 | OrthoFinder output from all 47 species | |
| Solyc06g071020.3.1 | Solyc06g071020 | pectate lyase | 0.07 | OrthoFinder output from all 47 species | |
| Solyc06g071840.3.1 | Solyc06g071840 | Probable pectate lyase 22 OS=Arabidopsis thaliana... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc06g083580.4.1 | Solyc06g083580 | pectate lyase | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g061890.3.1 | Solyc09g061890 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g31391 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g40115 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g41522 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g47003 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g57258 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g07683 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Tin_g09317 | No alias | EC_4.2 carbon-oxygen lyase & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e004654_P002 | Zm00001e004654 | pectate lyase | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e024959_P001 | AT59, Zm00001e024959 | pectate lyase | 0.1 | OrthoFinder output from all 47 species | |
| Zm00001e037311_P001 | Zm00001e037311 | pectate lyase | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0030570 | pectate lyase activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |