GSVIVT01007840001

Description : Protein translocation.nucleus.nucleocytoplasmic transport.karyopherin beta transport receptors.TNPO3 transport karyopherin

Gene families : OG0004537 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004537_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01007840001
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AT5G62600	No alias	ARM repeat superfamily protein	0.03	OrthoFinder output from all 47 species
Als_g01133	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.03	OrthoFinder output from all 47 species
Ceric.07G095100.1	Ceric.07G095100	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001027.19	No alias	No description available	0.01	OrthoFinder output from all 47 species
Msp_g00702	No alias	nucleocytoplasmic transport karyopherin *(MOS14) &...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0006886	intracellular protein transport	IEA	Interproscan
BP	GO:0008104	protein localization	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0015031	protein transport	None	Extended
BP	GO:0033036	macromolecule localization	None	Extended
BP	GO:0045184	establishment of protein localization	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended
BP	GO:0070727	cellular macromolecule localization	None	Extended
BP	GO:0071702	organic substance transport	None	Extended
BP	GO:0071705	nitrogen compound transport	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0051603	proteolysis involved in protein catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001494	Importin-beta_N	26	90
IPR013598	Exportin-1/Importin-b-like	98	242

External Links

No external refs found!