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  5. GSVIVT01007791001

GSVIVT01007791001


No description available


Gene families : OG0000815 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007791001

Target Alias Description ECC score Gene Family Method Actions
AT3G48020 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.07 OrthoFinder output from all 47 species
AT5G25240 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.02 OrthoFinder output from all 47 species
AT5G62865 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.07 OrthoFinder output from all 47 species
Aev_g30384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g31538 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g37418 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene17146.t1 Aspi01Gene17146 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene17148.t1 Aspi01Gene17148 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44143.t1 Aspi01Gene44143 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20118 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14082 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_278449g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_68645g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_80489g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g07673 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38281 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19862 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g65895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0070.g016721 No alias not classified & original description: CDS=1-624 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0152.g023465 No alias not classified & original description: CDS=1-1044 0.03 OrthoFinder output from all 47 species
Solyc07g007130.1.1 Solyc07g007130 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g56114 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e030876_P001 Zm00001e030876 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016161 beta-amylase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!