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  5. GSVIVT01006712001

GSVIVT01006712001


No description available


Gene families : OG0002286 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01006712001
Cluster HCCA: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00267520 evm_27.TU.AmTr_v1... No description available 0.06 OrthoFinder output from all 47 species
AT1G61260 No alias Protein of unknown function (DUF761) 0.04 OrthoFinder output from all 47 species
AT4G04990 No alias Protein of unknown function (DUF761) 0.05 OrthoFinder output from all 47 species
AT5G54300 No alias Protein of unknown function (DUF761) 0.03 OrthoFinder output from all 47 species
Adi_g113020 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05350 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g21279 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aop_g37363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene48347.t1 Aspi01Gene48347 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g00832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g21409 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g18088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006620.3.1 Solyc03g006620 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008480 DUF761_pln 266 301
IPR025520 DUF4408 47 79
No external refs found!