GSVIVT01006210001 (ATPB, PB)

Aliases : ATPB, PB

Description : ATP synthase subunit beta, chloroplastic OS=Vitis vinifera

Gene families : OG0000973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01006210001
Cluster	HCCA: Cluster_20

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00606p00000120	ATPB, PB,...	ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda	0.08	OrthoFinder output from all 47 species
ATCG00480	ATPB, PB	ATP synthase subunit beta	0.1	OrthoFinder output from all 47 species
Aev_g10806	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.14	OrthoFinder output from all 47 species
Aob_g06682	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.08	OrthoFinder output from all 47 species
Ceric.02G014100.1	ATPB, PB, Ceric.02G014100	not classified & original description: pacid=50586216...	0.08	OrthoFinder output from all 47 species
Ceric.03G022700.1	ATPB, PB, Ceric.03G022700	subunit beta of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 47 species
Ceric.09G048700.1	ATPB, PB, Ceric.09G048700	subunit beta of peripheral CF1 subcomplex of ATP...	0.07	OrthoFinder output from all 47 species
Ceric.1Z141700.1	ATPB, PB, Ceric.1Z141700	subunit beta of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
Ceric.1Z162000.1	ATPB, PB, Ceric.1Z162000	not classified & original description: pacid=50596930...	0.01	OrthoFinder output from all 47 species
Ceric.32G035500.1	ATPB, PB, Ceric.32G035500	not classified & original description: pacid=50597326...	0.02	OrthoFinder output from all 47 species
Cre17.g698000	No alias	Cellular respiration.oxidative phosphorylation.ATP...	0.02	OrthoFinder output from all 47 species
Dcu_g20874	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.05	OrthoFinder output from all 47 species
Gb_00175	ATPB, PB	ATP synthase subunit beta, chloroplastic OS=Picea abies...	0.12	OrthoFinder output from all 47 species
Gb_11358	ATPB, PB	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.11	OrthoFinder output from all 47 species
Gb_22349	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP synthase complex	0.12	OrthoFinder output from all 47 species
Gb_37463	ATPB, PB	subunit epsilon of peripheral CF1 subcomplex of ATP...	0.03	OrthoFinder output from all 47 species
LOC_Os01g25065.1	ATPB, PB, LOC_Os01g25065	ATP synthase subunit beta, chloroplastic OS=Oryza sativa...	0.13	OrthoFinder output from all 47 species
LOC_Os05g35320.1	ATPB, PB, LOC_Os05g35320	ATP synthase subunit beta, chloroplastic OS=Oryza sativa...	0.08	OrthoFinder output from all 47 species
LOC_Os06g39740.1	ATPB, PB, LOC_Os06g39740	subunit beta of peripheral CF1 subcomplex of ATP synthase complex	0.03	OrthoFinder output from all 47 species
LOC_Os10g21266.1	ATPB, PB, LOC_Os10g21266	subunit beta of peripheral CF1 subcomplex of ATP synthase complex	0.13	OrthoFinder output from all 47 species
LOC_Os12g10570.1	ATPB, PB, LOC_Os12g10570	ATP synthase subunit beta, chloroplastic OS=Oryza sativa...	0.14	OrthoFinder output from all 47 species
Lfl_g05507	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.12	OrthoFinder output from all 47 species
Ore_g00399	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.11	OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010854	ATPB, PB	not classified & original description: CDS=1-264	0.07	OrthoFinder output from all 47 species
Sacu_v1.1_s0228.g026385	ATPB, PB	not classified & original description: CDS=1-342	0.05	OrthoFinder output from all 47 species
Sam_g02504	No alias	subunit beta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Smo236855	ATPB, PB	ATP synthase subunit beta, chloroplastic OS=Psilotum nudum	0.05	OrthoFinder output from all 47 species
Spa_g51445	ATPB, PB	subunit beta of peripheral CF1 subcomplex of ATP...	0.02	OrthoFinder output from all 47 species
Zm00001e042082_P001	ATPB, PB, Zm00001e042082	ATP synthase subunit beta, chloroplastic OS=Zea mays...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006163	purine nucleotide metabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006812	monoatomic cation transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009141	nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009144	purine nucleoside triphosphate metabolic process	None	Extended
BP	GO:0009150	purine ribonucleotide metabolic process	None	Extended
BP	GO:0009199	ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	None	Extended
BP	GO:0009259	ribonucleotide metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0019693	ribose phosphate metabolic process	None	Extended
BP	GO:0034220	monoatomic ion transmembrane transport	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046034	ATP metabolic process	IEA	Interproscan
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	None	Extended
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072521	purine-containing compound metabolic process	None	Extended
BP	GO:0098655	monoatomic cation transmembrane transport	None	Extended
BP	GO:0098660	inorganic ion transmembrane transport	None	Extended
BP	GO:0098662	inorganic cation transmembrane transport	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1902600	proton transmembrane transport	IEA	Interproscan

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Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
CC	GO:0009507	chloroplast	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009522	photosystem I	IEP	HCCA
CC	GO:0009536	plastid	IEP	HCCA
CC	GO:0009579	thylakoid	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043227	membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	HCCA
BP	GO:0090304	nucleic acid metabolic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR004100	ATPase_F1/V1/A1_a/bsu_N	23	83

External Links

No external refs found!

GSVIVT01006210001 (ATPB, PB)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation