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  5. GSVIVT01004972001

GSVIVT01004972001 (NDHF)


Aliases : NDHF

Description : NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic OS=Vitis vinifera


Gene families : OG0001984 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001984_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004972001
Cluster HCCA: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
ATCG01010 NDHF NADH-Ubiquinone oxidoreductase (complex I), chain 5 protein 0.12 OrthoFinder output from all 47 species
Aev_g21696 NDHF component *(NdhF) of NDH membrane subcomplex M &... 0.08 OrthoFinder output from all 47 species
Ala_g14080 NAD5, NAD5.1, NAD5A component *(ND5/NQO12) of NADH dehydrogenase proton... 0.03 OrthoFinder output from all 47 species
Aob_g22621 NAD5, NAD5.1, NAD5A component *(ND5/NQO12) of NADH dehydrogenase proton... 0.04 OrthoFinder output from all 47 species
Ceric.03G094600.1 NAD5, NAD5.1,... not classified & original description: pacid=50572832... 0.04 OrthoFinder output from all 47 species
Ceric.05G043500.1 NDHF, Ceric.05G043500 component *(NdhF) of NDH membrane subcomplex M &... 0.04 OrthoFinder output from all 47 species
Ceric.1Z190200.1 NAD5, NAD5.1,... not classified & original description: pacid=50582116... 0.04 OrthoFinder output from all 47 species
Ceric.1Z191600.1 NAD5, NAD5.1,... not classified & original description: pacid=50606331... 0.04 OrthoFinder output from all 47 species
Ceric.1Z280200.1 NAD5, NAD5.1,... not classified & original description: pacid=50640935... 0.04 OrthoFinder output from all 47 species
Ceric.28G051300.1 NAD5, NAD5.1,... not classified & original description: pacid=50569573... 0.04 OrthoFinder output from all 47 species
Ceric.35G069000.1 NDHF, Ceric.35G069000 not classified & original description: pacid=50582003... 0.05 OrthoFinder output from all 47 species
Dcu_g21019 NDHF component *(NdhF) of NDH membrane subcomplex M &... 0.03 OrthoFinder output from all 47 species
Gb_27036 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_33783 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera... 0.04 OrthoFinder output from all 47 species
Gb_38087 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera... 0.04 OrthoFinder output from all 47 species
Gb_41730 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Oenothera... 0.04 OrthoFinder output from all 47 species
LOC_Os10g21418.1 NDHF, LOC_Os10g21418 component NdhF of NDH membrane subcomplex M 0.12 OrthoFinder output from all 47 species
Mp2g07160.1 No alias NADH-ubiquinone oxidoreductase chain 5 OS=Marchantia... 0.02 OrthoFinder output from all 47 species
Mp8g03540.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1844.g028196 NDHF not classified & original description: CDS=1-297 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s2154.g028279 NDHF not classified & original description: CDS=1-783 0.07 OrthoFinder output from all 47 species
Solyc00g500112.1.1 Solyc00g500112 NADH-ubiquinone oxidoreductase chain 5 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc00g500195.1.1 NDHF, Solyc00g500195 component NdhF of NDH membrane subcomplex M 0.05 OrthoFinder output from all 47 species
Solyc01g017230.2.1 Solyc01g017230 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.03 OrthoFinder output from all 47 species
Solyc02g011720.1.1 NDHF, Solyc02g011720 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.07 OrthoFinder output from all 47 species
Solyc05g013110.2.1 Solyc05g013110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g021190.2.1 NDHF, Solyc11g021190 NAD(P)H-quinone oxidoreductase subunit 5, chloroplastic... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001750 ND/Mrp_mem 2 98
No external refs found!