GSVIVT01004272001 (ATCSLE1, CSLE1)

Aliases : ATCSLE1, CSLE1

Description : Cellulose synthase-like protein E6 OS=Oryza sativa subsp. japonica

Gene families : OG0000089 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000089_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01004272001
Cluster	HCCA: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00017p00032130	CSLB04, ATCSLB4,...	Cellulose synthase-like protein H2 OS=Oryza sativa subsp. indica	0.03	OrthoFinder output from all 47 species
AMTR_s00017p00225060	CSLB04, ATCSLB4,...	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.05	OrthoFinder output from all 47 species
AMTR_s00022p00086120	ATH-A, CESA2,...	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.02	OrthoFinder output from all 47 species
AMTR_s00061p00200560	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.06	OrthoFinder output from all 47 species
AT2G32530	ATCSLB03, CSLB03, ATCSLB3	cellulose synthase-like B3	0.04	OrthoFinder output from all 47 species
Adi_g082699	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g117946	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g42384	MUR10, ATCESA7,...	glycosyltransferase *(CSLB/CSLH) & original description: none	0.04	OrthoFinder output from all 47 species
Aob_g06077	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aop_g30416	MUR10, ATCESA7,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g63761	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aspi01Gene23400.t1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30179.t1	ATCSLD3, KJK,...	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene30569.t1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Aspi01Gene31998.t1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Aspi01Gene62557.t1	IXR1, CEV1,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene62558.t1	MUR10, ATCESA7,...	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.09G024100.1	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.04	OrthoFinder output from all 47 species
Dac_g05773	MUR10, ATCESA7,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g10016	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ehy_g10276	ATCSLD5, CSLD5, SOS6	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01002911001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.05	OrthoFinder output from all 47 species
GSVIVT01006760001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
GSVIVT01007038001	ATCSLE1, CSLE1	Cellulose synthase-like protein E1 OS=Arabidopsis thaliana	0.06	OrthoFinder output from all 47 species
GSVIVT01007039001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.09	OrthoFinder output from all 47 species
GSVIVT01007042001	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.07	OrthoFinder output from all 47 species
GSVIVT01018144001	ATCSLG2, CSLG2	Cellulose synthase-like protein G2 OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
GSVIVT01028234001	AtCESA1, RSW1, CESA1	Cell wall.cellulose.synthesis.cellulose synthase complex...	0.03	OrthoFinder output from all 47 species
GSVIVT01030461001	CSLB04, ATCSLB4, ATCSLB04	Cellulose synthase-like protein B4 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_02801	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Gb_03770	CESA5	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
Gb_06082	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 9 [UDP-forming]...	0.02	OrthoFinder output from all 47 species
Gb_06085	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 7 [UDP-forming]...	0.03	OrthoFinder output from all 47 species
Gb_09688	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 9 [UDP-forming]...	0.03	OrthoFinder output from all 47 species
Gb_25252	ATCSLE1, CSLE1	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Gb_31674	MUR10, ATCESA7,...	Probable cellulose synthase A catalytic subunit 8...	0.02	OrthoFinder output from all 47 species
Gb_37358	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 9 [UDP-forming]...	0.03	OrthoFinder output from all 47 species
Gb_39671	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.04	OrthoFinder output from all 47 species
LOC_Os07g36610.1	ATCSLD3, KJK,...	D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g36690.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
LOC_Os07g36700.1	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species
LOC_Os08g25710.1	ATCSLD4, CSLD4,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
LOC_Os09g25490.1	MUR10, ATCESA7,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
LOC_Os09g30120.1	ATCSLE1, CSLE1,...	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
LOC_Os10g32980.1	CESA4, NWS2,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
Lfl_g06718	AtCESA1, RSW1, CESA1	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Lfl_g18769	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
MA_10430953g0010	MUR10, ATCESA7,...	Cellulose synthase-like protein H1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_10436687g0010	ATCSLE1, CSLE1	Cellulose synthase-like protein E1 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
MA_174181g0010	IXR1, CEV1,...	catalytic component CesA of cellulose synthase complex	0.03	OrthoFinder output from all 47 species
MA_195271g0010	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
MA_264460g0010	ATCSLE1, CSLE1	Cellulose synthase-like protein E6 OS=Oryza sativa...	0.05	OrthoFinder output from all 47 species
MA_415945g0010	ATCSLB05, CSLB05, ATCSLB5	Cellulose synthase-like protein B5 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
MA_7650g0020	ATH-A, CESA2, ATCESA2	Probable cellulose synthase A catalytic subunit 3...	0.02	OrthoFinder output from all 47 species
MA_9184g0010	MUR10, ATCESA7,...	Cellulose synthase A catalytic subunit 7 [UDP-forming]...	0.03	OrthoFinder output from all 47 species
Mp2g02440.1	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Mp2g05640.1	ATCSLD3, KJK, CSLD3	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Mp5g24530.1	ATCSLD2, CSLD2	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Msp_g48239	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Msp_g48828	MUR10, ATCESA7,...	glycosyltransferase *(CSLB/CSLH) & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g37613	ATCSLD3, KJK, CSLD3	mannan synthase *(CSLD) & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g13589	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Pp3c1_22600V3.1	ATH-A, CESA2,...	Cellulose synthase family protein	0.02	OrthoFinder output from all 47 species
Ppi_g22229	IXR1, CEV1,...	catalytic component *(CesA) of cellulose synthase...	0.03	OrthoFinder output from all 47 species
Ppi_g22257	ATH-A, CESA2, ATCESA2	catalytic component *(CesA) of cellulose synthase...	0.02	OrthoFinder output from all 47 species
Solyc03g005450.3.1	ATCSLG2, CSLG2,...	Cellulose synthase-like protein G1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc08g005280.2.1	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Zm00001e002486_P001	ATCSLD3, KJK,...	mannan synthase (CSLD)	0.03	OrthoFinder output from all 47 species
Zm00001e004740_P001	ATCSLD3, KJK,...	Probable mixed-linked glucan synthase 7 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
Zm00001e008117_P005	CSLB04, ATCSLB4,...	D-glucan synthase (CSLH)	0.03	OrthoFinder output from all 47 species
Zm00001e010533_P001	ATCSLD3, KJK,...	D-glucan synthase (CSLF)	0.04	OrthoFinder output from all 47 species
Zm00001e018517_P001	ATCSLG2, CSLG2,...	Cellulose synthase-like protein G2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Zm00001e035205_P002	ATCSLD2, CSLD2,...	D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
Zm00001e035207_P001	ATCSLD3, KJK,...	D-glucan synthase (CSLF)	0.03	OrthoFinder output from all 47 species
Zm00001e039669_P001	ATCSLD5, CSLD5,...	mannan synthase (CSLD)	0.02	OrthoFinder output from all 47 species
Zm00001e040201_P001	ATCSLD2, CSLD2,...	mannan synthase (CSLD). D-glucan synthase (CSLF)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	HCCA
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0008066	glutamate receptor activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022835	transmitter-gated channel activity	IEP	HCCA
MF	GO:0022836	gated channel activity	IEP	HCCA
MF	GO:0022839	monoatomic ion gated channel activity	IEP	HCCA
MF	GO:0030594	neurotransmitter receptor activity	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
MF	GO:0043531	ADP binding	IEP	HCCA
MF	GO:0050662	obsolete coenzyme binding	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	112	352

External Links

No external refs found!

GSVIVT01004272001 (ATCSLE1, CSLE1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation