GSVIVT01003852001 (STM, SHM1, SHMT1)


Aliases : STM, SHM1, SHMT1

Description : Photosynthesis.photorespiration.serine hydroxymethyltransferase


Gene families : OG0000518 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000518_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003852001

Target Alias Description ECC score Gene Family Method Actions
Adi_g081286 STM, SHM1, SHMT1 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ala_g06665 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene54986.t1 SHM4, Aspi01Gene54986 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
GSVIVT01003857001 STM, SHM1, SHMT1 Serine hydroxymethyltransferase, mitochondrial... 0.04 OrthoFinder output from all 47 species
LOC_Os11g26860.1 SHM4, LOC_Os11g26860 Serine hydroxymethyltransferase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g12553 SHM7 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Ore_g03183 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.03 OrthoFinder output from all 47 species
Pnu_g08453 SHM4 EC_2.1 transferase transferring one-carbon group &... 0.05 OrthoFinder output from all 47 species
Smo166496 SHM4 Amino acid metabolism.biosynthesis.serine... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
InterPro domains Description Start Stop
IPR039429 SHMT-like_dom 59 453
No external refs found!