GSVIVT01003683001


Description : RNA biosynthesis.transcriptional activation.Trihelix transcription factor


Gene families : OG0002113 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002113_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003683001

Target Alias Description ECC score Gene Family Method Actions
Adi_g069214 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g096869 FIP2 Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001295 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g009913 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g34228 No alias Trihelix-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G056800.1 Ceric.10G056800 Trihelix-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dcu_g05375 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17678 No alias Trihelix-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Gb_03362 No alias transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
LOC_Os08g37810.1 LOC_Os08g37810 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
LOC_Os10g41460.1 LOC_Os10g41460 transcription factor (Trihelix) 0.03 OrthoFinder output from all 47 species
Len_g00431 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00734 No alias Trihelix-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g55195 No alias Trihelix-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0181.g024830 No alias Trihelix-type transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e024316_P001 Zm00001e024316 transcription factor (Trihelix) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!