1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01003167001

GSVIVT01003167001 (SEP1)


Aliases : SEP1

Description : Photosynthesis.photophosphorylation.photosystem II.LHC-related protein groups.two-helix LHC-related protein group.SEP1 protein


Gene families : OG0007715 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007715_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003167001
Cluster HCCA: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
AT4G34190 SEP1 stress enhanced protein 1 0.08 OrthoFinder output from all 47 species
Adi_g007325 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.07 OrthoFinder output from all 47 species
Aev_g11265 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.02 OrthoFinder output from all 47 species
Ala_g20676 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.05 OrthoFinder output from all 47 species
Aob_g00643 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.03 OrthoFinder output from all 47 species
Aop_g11480 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.05 OrthoFinder output from all 47 species
Azfi_s0179.g056293 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.05 OrthoFinder output from all 47 species
Ceric.10G038300.1 SEP1, Ceric.10G038300 light-responsive regulatory protein *(SEP1) & original... 0.03 OrthoFinder output from all 47 species
Dac_g05406 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.03 OrthoFinder output from all 47 species
Dcu_g21079 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.04 OrthoFinder output from all 47 species
Ehy_g06382 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.05 OrthoFinder output from all 47 species
Gb_32155 SEP1 SEP1 LHC-related protein 0.05 OrthoFinder output from all 47 species
Lfl_g06407 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.06 OrthoFinder output from all 47 species
Mp3g06770.1 NPQ4, PSBS SEP1 LHC-related protein 0.07 OrthoFinder output from all 47 species
Msp_g01373 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.06 OrthoFinder output from all 47 species
Ppi_g01617 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.04 OrthoFinder output from all 47 species
Solyc01g107660.3.1 SEP1, Solyc01g107660 SEP1 LHC-related protein 0.09 OrthoFinder output from all 47 species
Spa_g00094 SEP1 light-responsive regulatory protein *(SEP1) & original... 0.1 OrthoFinder output from all 47 species
Tin_g03659 No alias light-responsive regulatory protein *(SEP1) & original... 0.05 OrthoFinder output from all 47 species
Zm00001e004851_P001 SEP1, Zm00001e004851 SEP1 LHC-related protein 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005622 intracellular anatomical structure IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008565 obsolete protein transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0045454 cell redox homeostasis IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!