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  5. GSVIVT01002904001

GSVIVT01002904001 (V157, PDE166, ALB1,...)


Aliases : V157, PDE166, ALB1, CHLD, ALB-1V

Description : Magnesium-chelatase subunit ChlD, chloroplastic OS=Oryza sativa subsp. indica


Gene families : OG0005530 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005530_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002904001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00053p00152680 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
AT1G08520 V157, PDE166,... ALBINA 1 0.07 OrthoFinder output from all 47 species
Adi_g106636 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Aev_g43655 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.02 OrthoFinder output from all 47 species
Azfi_s0049.g030898 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Ceric.13G055900.1 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.07 OrthoFinder output from all 47 species
Cre05.g242000 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.03 OrthoFinder output from all 47 species
Dcu_g03080 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
Ehy_g11037 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.02 OrthoFinder output from all 47 species
LOC_Os03g59640.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.05 OrthoFinder output from all 47 species
Lfl_g04202 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
MA_173818g0010 V157, PDE166,... Magnesium-chelatase subunit ChlD, chloroplastic... 0.04 OrthoFinder output from all 47 species
Mp6g04260.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.04 OrthoFinder output from all 47 species
Nbi_g13327 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Pir_g01370 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.03 OrthoFinder output from all 47 species
Ppi_g56909 V157, PDE166,... EC_6.6 ligase forming nitrogen-metal bond & original... 0.04 OrthoFinder output from all 47 species
Sam_g18049 No alias EC_6.6 ligase forming nitrogen-metal bond & original... 0.05 OrthoFinder output from all 47 species
Smo174616 V157, PDE166,... Coenzyme metabolism.tetrapyrrol biosynthesis.chlorophyll... 0.04 OrthoFinder output from all 47 species
Solyc04g015490.4.1 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.03 OrthoFinder output from all 47 species
Zm00001e011796_P001 V157, PDE166,... component CHL-D of magnesium-chelatase complex 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR025558 DUF4283 339 483
No external refs found!