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Aliases : RAT5, HTA1, ATHTA1
Description : Chromatin organisation.histones.H2A-type histone
Gene families : OG0000117 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000117_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00057p00215390 | HTA6,... | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00115p00128810 | RAT5, HTA1,... | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| AT4G27230 | HTA2 | histone H2A 2 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g003557 | HTA6 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g011159 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011160 | HTA7 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g034181 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g043980 | RAT5, HTA1, ATHTA1 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g052169 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g082134 | HTA6 | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g04264 | HTA13 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g30450 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene10197.t1 | RAT5, HTA1,... | histone *(H2A) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0005.g009474 | GAMMA-H2AX,... | histone *(H2A) & original description: CDS=131-538 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g07967 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.06G046500.1 | HTA7, Ceric.06G046500 | histone *(H2A) & original description: pacid=50619602... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.31G042200.1 | HTA2, Ceric.31G042200 | histone *(H2A) & original description: pacid=50574126... | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g264750 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g264950 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g265350 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g266700 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g268050 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g268300 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g271350 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g273900 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g274200 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g274800 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g275850 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g276500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre06.g276950 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g504500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g504750 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g505550 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre12.g506250 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre13.g570100 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g708550 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g709200 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g710400 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g711700 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g713400 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Cre17.g714500 | HTA10 | Chromatin organisation.histones.H2A-type histone | 0.01 | OrthoFinder output from all 47 species | |
| Gb_06384 | HTA6 | histone (H2A) | 0.01 | OrthoFinder output from all 47 species | |
| Gb_29778 | HTA7 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g17100.1 | HTA12, LOC_Os03g17100 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os05g02300.1 | HTA12, LOC_Os05g02300 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g39892 | HTA10 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_10426943g0010 | HTA7 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| MA_130065g0010 | HTA6 | histone (H2A) | 0.01 | OrthoFinder output from all 47 species | |
| MA_213048g0010 | HTA7 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| MA_962778g0010 | HTA7 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g11307 | HTA10 | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g27681 | HTA6 | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44884 | HTA6 | histone *(H2A) & original description: none | 0.01 | OrthoFinder output from all 47 species | |
| Pir_g29875 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c5_1791V3.1 | HTA10, Pp3c5_1791 | histone H2A 10 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c5_1800V3.1 | HTA10, Pp3c5_1800 | histone H2A 10 | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g03457 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g29426 | No alias | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo170948 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Smo73637 | GAMMA-H2AX,... | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Smo76653 | HTA2 | Chromatin organisation.histones.H2A-type histone | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g099410.3.1 | HTA7, Solyc01g099410 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g005220.4.1 | GAMMA-H2AX,... | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g084430.4.1 | GAMMA-H2AX,... | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc09g010400.3.1 | HTA12, Solyc09g010400 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g006560.4.1 | HTA10, Solyc10g006560 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc11g073260.2.1 | HTA12, Solyc11g073260 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc12g005270.2.1 | HTA10, Solyc12g005270 | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g03104 | GAMMA-H2AX,... | histone *(H2A) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010515_P001 | HTA2, Zm00001e010515 | histone (H2A) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e010516_P001 | RAT5, HTA1,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e012144_P001 | GAMMA-H2AX,... | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e033014_P001 | HTA6, Zm00001e033014 | histone (H2A) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e035183_P002 | RAT5, HTA1,... | histone (H2A) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEA | Interproscan |
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005741 | mitochondrial outer membrane | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006952 | defense response | IEP | HCCA |
| CC | GO:0019867 | outer membrane | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| CC | GO:0031968 | organelle outer membrane | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| CC | GO:0098588 | bounding membrane of organelle | IEP | HCCA |
| No external refs found! |