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  5. GSVIVT01002136001

GSVIVT01002136001 (ATWBC11, ABCG11, DSO,...)


Aliases : ATWBC11, ABCG11, DSO, COF1, WBC11

Description : Solute transport.primary active transport.ABC superfamily.ABC2 family.subfamily ABCG transporter


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002136001

Target Alias Description ECC score Gene Family Method Actions
Ala_g25229 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31284 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g16742 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g28408 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024228001 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Len_g30376 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57266 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34848 ATWBC11, ABCG11,... not classified & original description: none 0.12 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 1 136
IPR013525 ABC_2_trans 285 497
No external refs found!