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  5. GSVIVT01002029001

GSVIVT01002029001 (SFR6)


Aliases : SFR6

Description : RNA biosynthesis.RNA polymerase II-dependent transcription.MEDIATOR transcription co-activator complex.tail module.MED16 component


Gene families : OG0004636 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004636_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01002029001

Target Alias Description ECC score Gene Family Method Actions
AT4G04920 SFR6 sensitive to freezing 6 0.05 OrthoFinder output from all 47 species
Aev_g01581 SFR6 component *(MED16) of tail module of MEDIATOR... 0.02 OrthoFinder output from all 47 species
Ceric.22G020500.1 SFR6, Ceric.22G020500 component *(MED16) of tail module of MEDIATOR... 0.06 OrthoFinder output from all 47 species
Cre04.g220600 No alias No description available 0.02 OrthoFinder output from all 47 species
MA_10435759g0010 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Mp4g19580.1 SFR6 component MED16 of tail module of MEDIATOR transcription... 0.03 OrthoFinder output from all 47 species
Nbi_g02457 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Pir_g09806 SFR6 component *(MED16) of tail module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Solyc02g078520.4.1 SFR6, Solyc02g078520 component MED16 of tail module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Spa_g08446 SFR6 component *(MED16) of tail module of MEDIATOR... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
BP GO:0031047 RNA-mediated gene silencing IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA

No InterPro domains available for this sequence

No external refs found!