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  5. GSVIVT01001399001

GSVIVT01001399001 (RLK1)


Aliases : RLK1

Description : G-type lectin S-receptor-like serine/threonine-protein kinase LECRK3 OS=Oryza sativa subsp. japonica


Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001399001

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01000655001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01000842001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01012443001 No alias Putative disease resistance RPP13-like protein 1... 0.06 OrthoFinder output from all 47 species
GSVIVT01013508001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.04 OrthoFinder output from all 47 species
GSVIVT01013533001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01019351001 No alias Putative disease resistance protein RGA4 OS=Solanum bulbocastanum 0.03 OrthoFinder output from all 47 species
GSVIVT01022856001 No alias Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01022961001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
GSVIVT01023320001 ZAR1 Putative disease resistance RPP13-like protein 1... 0.04 OrthoFinder output from all 47 species
GSVIVT01036657001 No alias Putative disease resistance RPP13-like protein 1... 0.06 OrthoFinder output from all 47 species
GSVIVT01038298001 No alias Putative disease resistance RPP13-like protein 1... 0.03 OrthoFinder output from all 47 species
LOC_Os08g42930.1 LOC_Os08g42930 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.03 OrthoFinder output from all 47 species
LOC_Os08g43050.1 LOC_Os08g43050 Putative disease resistance protein RGA1 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os09g14490.1 LOC_Os09g14490 Putative disease resistance RPP13-like protein 1... 0.02 OrthoFinder output from all 47 species
LOC_Os10g07400.2 LOC_Os10g07400 Putative disease resistance protein RGA1 OS=Solanum... 0.04 OrthoFinder output from all 47 species
LOC_Os12g29160.1 LOC_Os12g29160 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g32680.1 LOC_Os12g32680 Disease resistance protein RGA2 OS=Solanum bulbocastanum... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0043531 ADP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
CC GO:0005779 obsolete integral component of peroxisomal membrane IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0031012 extracellular matrix IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
InterPro domains Description Start Stop
IPR001480 Bulb-type_lectin_dom 708 793
IPR001480 Bulb-type_lectin_dom 1395 1482
IPR001480 Bulb-type_lectin_dom 87 174
IPR001480 Bulb-type_lectin_dom 1041 1128
IPR000719 Prot_kinase_dom 846 966
IPR000858 S_locus_glycoprot_dom 267 340
IPR002182 NB-ARC 1898 1994
No external refs found!