1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01001165001

GSVIVT01001165001


No description available


Gene families : OG0004955 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004955_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001165001

Target Alias Description ECC score Gene Family Method Actions
AT4G02720 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 OrthoFinder output from all 47 species
Als_g11613 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Cba_g04063 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Cre01.g032250 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g01465 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28220.1 LOC_Os09g28220 rDNA transcriptional regulator (MAS2) 0.05 OrthoFinder output from all 47 species
Mp7g16690.1 No alias rDNA transcriptional regulator (MAS2) 0.04 OrthoFinder output from all 47 species
Pir_g10375 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species
Pp3c9_17960V3.1 Pp3c9_17960 No annotation 0.02 OrthoFinder output from all 47 species
Sam_g12202 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.02 OrthoFinder output from all 47 species
Sam_g38989 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g071660.1.1 Solyc11g071660 rDNA transcriptional regulator (MAS2) 0.07 OrthoFinder output from all 47 species
Spa_g15449 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.04 OrthoFinder output from all 47 species
Tin_g26995 No alias regulatory protein *(MAS2) of rDNA transcription &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR009269 NKAP_C 347 445
No external refs found!