GSVIVT01000797001 (CDC45)

Aliases : CDC45

Description : Cell cycle.interphase.DNA replication.initiation.CDC45 auxiliary factor

Gene families : OG0008920 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008920_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01000797001
Cluster	HCCA: Cluster_85

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00119p00070320	CDC45,...	Cell cycle.interphase.DNA replication.initiation.CDC45...	0.03	OrthoFinder output from all 47 species
AT3G25100	CDC45	cell division cycle 45	0.14	OrthoFinder output from all 47 species
Aop_g04657	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.14	OrthoFinder output from all 47 species
Ceric.22G068600.1	CDC45, Ceric.22G068600	cell cycle auxiliary factor *(CDC45) & original...	0.06	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001302.6	No alias	Cell cycle.interphase.DNA replication.initiation.CDC45...	0.04	OrthoFinder output from all 47 species
Cre06.g270250	No alias	Cell cycle.interphase.DNA replication.initiation.CDC45...	0.06	OrthoFinder output from all 47 species
Dcu_g14842	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.02	OrthoFinder output from all 47 species
Gb_40696	CDC45	CDC45 cell cycle auxiliary factor	0.18	OrthoFinder output from all 47 species
LOC_Os11g03430.1	CDC45, LOC_Os11g03430	CDC45 cell cycle auxiliary factor	0.21	OrthoFinder output from all 47 species
LOC_Os12g03130.1	CDC45, LOC_Os12g03130	CDC45 cell cycle auxiliary factor	0.21	OrthoFinder output from all 47 species
MA_94094g0010	CDC45	CDC45 cell cycle auxiliary factor	0.13	OrthoFinder output from all 47 species
Mp6g20220.1	CDC45	CDC45 cell cycle auxiliary factor	0.14	OrthoFinder output from all 47 species
Msp_g11586	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.16	OrthoFinder output from all 47 species
Nbi_g09206	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.07	OrthoFinder output from all 47 species
Ppi_g15977	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.09	OrthoFinder output from all 47 species
Solyc09g059440.1.1	CDC45, Solyc09g059440	CDC45 cell cycle auxiliary factor	0.15	OrthoFinder output from all 47 species
Spa_g00437	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.08	OrthoFinder output from all 47 species
Tin_g06817	CDC45	cell cycle auxiliary factor *(CDC45) & original description: none	0.11	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006270	DNA replication initiation	IEA	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

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CladeCba_g26166

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	IEP	HCCA
MF	GO:0003674	molecular_function	IEP	HCCA
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0003774	cytoskeletal motor activity	IEP	HCCA
MF	GO:0003777	microtubule motor activity	IEP	HCCA
MF	GO:0003916	DNA topoisomerase activity	IEP	HCCA
MF	GO:0003918	DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity	IEP	HCCA
MF	GO:0004519	endonuclease activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005515	protein binding	IEP	HCCA
MF	GO:0005524	ATP binding	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006265	DNA topological change	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007018	microtubule-based movement	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016043	cellular component organization	IEP	HCCA
MF	GO:0017076	purine nucleotide binding	IEP	HCCA
MF	GO:0030554	adenyl nucleotide binding	IEP	HCCA
MF	GO:0032553	ribonucleotide binding	IEP	HCCA
MF	GO:0032555	purine ribonucleotide binding	IEP	HCCA
MF	GO:0032559	adenyl ribonucleotide binding	IEP	HCCA
MF	GO:0035639	purine ribonucleoside triphosphate binding	IEP	HCCA
MF	GO:0036094	small molecule binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043168	anion binding	IEP	HCCA
BP	GO:0051276	chromosome organization	IEP	HCCA
BP	GO:0071103	DNA conformation change	IEP	HCCA
BP	GO:0071840	cellular component organization or biogenesis	IEP	HCCA
MF	GO:0097159	organic cyclic compound binding	IEP	HCCA
MF	GO:0097367	carbohydrate derivative binding	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
MF	GO:0140657	ATP-dependent activity	IEP	HCCA
MF	GO:1901265	nucleoside phosphate binding	IEP	HCCA
MF	GO:1901363	heterocyclic compound binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003874	CDC45	109	496
IPR003874	CDC45	31	102

External Links

No external refs found!

GSVIVT01000797001 (CDC45)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation