1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01000606001

GSVIVT01000606001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000606001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00044p00042560 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 OrthoFinder output from all 47 species
AMTR_s00119p00095480 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
AT2G40260 No alias Homeodomain-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G45580 No alias Homeodomain-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g080178 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g06650 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g06660 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aev_g39180 No alias transcription factor *(CLAUSA) & original description: none 0.01 OrthoFinder output from all 47 species
Als_g04353 PHL1 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Als_g22007 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Als_g22341 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene18702.t1 KAN, KAN1,... KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24371.t1 Aspi01Gene24371 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene48429.t1 Aspi01Gene48429 GARP subgroup PHL transcription factor & original... 0.08 OrthoFinder output from all 47 species
Azfi_s0003.g007457 PHR1, AtPHR1 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Cba_g03918 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Cba_g21846 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G027500.1 Ceric.11G027500 transcription factor *(CLAUSA) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.14G081900.1 Ceric.14G081900 GARP subgroup PHL transcription factor & original... 0.04 OrthoFinder output from all 47 species
Ceric.22G025700.1 Ceric.22G025700 transcription factor *(CLAUSA) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.31G067100.1 Ceric.31G067100 GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g34786 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dde_g16600 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01013085001 KAN2 RNA biosynthesis.transcriptional activation.MYB... 0.09 OrthoFinder output from all 47 species
GSVIVT01015900001 APL, WDY RNA biosynthesis.transcriptional activation.MYB... 0.03 OrthoFinder output from all 47 species
GSVIVT01021072001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.06 OrthoFinder output from all 47 species
GSVIVT01026319001 KAN, KAN1 RNA biosynthesis.transcriptional activation.MYB... 0.12 OrthoFinder output from all 47 species
GSVIVT01030315001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.09 OrthoFinder output from all 47 species
GSVIVT01032776001 No alias Putative Myb family transcription factor At1g14600... 0.08 OrthoFinder output from all 47 species
Gb_17469 KAN, KAN1 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Gb_25991 No alias G2-like GARP transcription factor 0.08 OrthoFinder output from all 47 species
Gb_27262 No alias G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Gb_40510 No alias G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os03g03760.1 LOC_Os03g03760 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
LOC_Os03g20900.1 LOC_Os03g20900 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os03g21240.1 PHL1, LOC_Os03g21240 PHR1 transcription factor involved in proline synthesis... 0.02 OrthoFinder output from all 47 species
LOC_Os05g40960.1 LOC_Os05g40960 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
LOC_Os08g06370.1 KAN2, LOC_Os08g06370 G2-like GARP transcription factor 0.06 OrthoFinder output from all 47 species
LOC_Os08g33750.1 LOC_Os08g33750 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
LOC_Os11g01480.1 LOC_Os11g01480 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
LOC_Os12g01490.1 LOC_Os12g01490 Putative Myb family transcription factor At1g14600... 0.02 OrthoFinder output from all 47 species
Len_g09088 KAN2 KANADI-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g10417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48215 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Lfl_g05331 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432937g0010 KAN4, ATS G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Mp3g04970.1 KAN, KAN1 G2-like GARP transcription factor 0.02 OrthoFinder output from all 47 species
Msp_g44491 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Ore_g13479 No alias transcription factor *(CLAUSA) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g20359 KAN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36046 KAN4, ATS KANADI-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g23688 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pir_g26301 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Pir_g39083 No alias GARP subgroup PHL transcription factor & original... 0.05 OrthoFinder output from all 47 species
Pir_g66199 No alias transcription factor *(CLAUSA) & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g04161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17236 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g08333 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Sam_g40619 No alias GARP subgroup PHL transcription factor & original... 0.02 OrthoFinder output from all 47 species
Smo417629 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 OrthoFinder output from all 47 species
Solyc04g079600.3.1 KAN4, ATS, Solyc04g079600 G2-like GARP transcription factor 0.1 OrthoFinder output from all 47 species
Solyc06g051060.4.1 Solyc06g051060 G2-like GARP transcription factor 0.05 OrthoFinder output from all 47 species
Solyc06g066180.4.1 Solyc06g066180 G2-like GARP transcription factor 0.09 OrthoFinder output from all 47 species
Spa_g05501 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Spa_g25583 No alias GARP subgroup PHL transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e005097_P001 KAN4, ATS, Zm00001e005097 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e005797_P001 KAN4, ATS, Zm00001e005797 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e013758_P003 APL, WDY, Zm00001e013758 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e015514_P001 KAN2, Zm00001e015514 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e015547_P002 Zm00001e015547 Myb-related protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e022454_P001 Zm00001e022454 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e027318_P001 Zm00001e027318 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e030689_P002 Zm00001e030689 G2-like GARP transcription factor 0.04 OrthoFinder output from all 47 species
Zm00001e031978_P001 Zm00001e031978 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species
Zm00001e037761_P001 Zm00001e037761 G2-like GARP transcription factor 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR001005 SANT/Myb 21 71
No external refs found!