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Description : Vesicle trafficking.regulation of membrane tethering and fusion.RAB-GTPase guanine nucleotide exchange factor (RAB-GEF) activities.PUF2 plant-specific RAB5 effector
Gene families : OG0003055 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003055_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G24560 | No alias | unknown protein; BEST Arabidopsis thaliana protein match... | 0.05 | OrthoFinder output from all 47 species | |
| Als_g11726 | No alias | RAB5 plant-specific effector *(PUF2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g08509 | No alias | RAB5 plant-specific effector *(PUF2) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0007.g011105 | No alias | RAB5 plant-specific effector *(PUF2) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G035300.1 | Ceric.38G035300 | not classified & original description: pacid=50579925... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g01648 | No alias | RAB5 plant-specific effector *(PUF2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g08633 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g01251 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g22235 | No alias | RAB5 plant-specific effector *(PUF2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g09222 | No alias | RAB5 plant-specific effector *(PUF2) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009501_P001 | Zm00001e009501 | plant-specific RAB5 effector (PUF2) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |