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  5. Solyc12g100220.2.1

Solyc12g100220.2.1 (Solyc12g100220)


Aliases : Solyc12g100220

Description : Short-chain type dehydrogenase/reductase OS=Picea abies (sp|q08632|sdr1_picab : 112.0)


Gene families : OG0001408 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001408_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g100220.2.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AT1G62610 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G17845 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G01980 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.08 OrthoFinder output from all 47 species
AT3G55290 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.07 OrthoFinder output from all 47 species
AT3G55310 No alias NAD(P)-binding Rossmann-fold superfamily protein 0.03 OrthoFinder output from all 47 species
Ala_g08126 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g39945 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30579 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025755001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_27390 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g01144 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g05800.1 No alias NADPH-dependent aldehyde reductase-like protein,... 0.02 OrthoFinder output from all 47 species
Msp_g11742 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07347 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002962 No alias not classified & original description: CDS=1-843 0.05 OrthoFinder output from all 47 species
Sam_g31650 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g047800.3.1 Solyc07g047800 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc10g078360.3.1 Solyc10g078360 3-oxoacyl-[acyl-carrier-protein] reductase,... 0.04 OrthoFinder output from all 47 species
Solyc12g044940.2.1 Solyc12g044940 Short-chain type dehydrogenase/reductase OS=Picea abies... 0.05 OrthoFinder output from all 47 species
Solyc12g045030.2.1 Solyc12g045030 Short-chain type dehydrogenase/reductase OS=Picea abies... 0.04 OrthoFinder output from all 47 species
Solyc12g100280.3.1 Solyc12g100280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e011652_P001 Zm00001e011652 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008150 biological_process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0030259 lipid glycosylation IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002347 SDR_fam 10 212
No external refs found!