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  5. Solyc12g099700.3.1

Solyc12g099700.3.1 (Solyc12g099700)


Aliases : Solyc12g099700

Description : Lipoyl synthase, chloroplastic OS=Ricinus communis (sp|b9rx57|lisc_ricco : 583.0) & Enzyme classification.EC_2 transferases.EC_2.8 transferase transferring sulfur-containing group(50.2.8 : 470.6)


Gene families : OG0001710 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001710_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g099700.3.1
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AT5G08415 No alias Radical SAM superfamily protein 0.06 OrthoFinder output from all 47 species
Aop_g05882 LIP1 EC_2.8 transferase transferring sulfur-containing group... 0.02 OrthoFinder output from all 47 species
Azfi_s0184.g056536 No alias EC_2.8 transferase transferring sulfur-containing group... 0.02 OrthoFinder output from all 47 species
Azfi_s0331.g065402 LIP1 EC_2.8 transferase transferring sulfur-containing group... 0.05 OrthoFinder output from all 47 species
Cba_g00755 LIP1 EC_2.8 transferase transferring sulfur-containing group... 0.05 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000865.57 LIP1 Enzyme classification.EC_2 transferases.EC_2.8... 0.02 OrthoFinder output from all 47 species
Cre02.g114400 No alias Lipoyl synthase, chloroplastic OS=Chlamydomonas reinhardtii 0.05 OrthoFinder output from all 47 species
Cre08.g359700 LIP1 Coenzyme metabolism.lipoic acid synthesis.lipoate synthase 0.02 OrthoFinder output from all 47 species
Zm00001e019700_P001 Zm00001e019700 Lipoyl synthase 2, chloroplastic OS=Zea mays... 0.03 OrthoFinder output from all 47 species
Zm00001e028978_P001 Zm00001e028978 Lipoyl synthase 1, chloroplastic OS=Zea mays... 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003989 acetyl-CoA carboxylase activity IEP HCCA
MF GO:0004834 tryptophan synthase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006568 tryptophan metabolic process IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006586 indolalkylamine metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
CC GO:0009317 acetyl-CoA carboxylase complex IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016421 CoA carboxylase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016836 hydro-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016885 ligase activity, forming carbon-carbon bonds IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0042430 indole-containing compound metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
InterPro domains Description Start Stop
IPR031691 LIAS_N 132 169
IPR007197 rSAM 193 353
No external refs found!