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  5. Solyc12g099340.3.1

Solyc12g099340.3.1 (Solyc12g099340)


Aliases : Solyc12g099340

Description : transcription factor (CAMTA)


Gene families : OG0000648 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000648_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g099340.3.1

Target Alias Description ECC score Gene Family Method Actions
AT1G67310 No alias Calmodulin-binding transcription activator protein with... 0.03 OrthoFinder output from all 47 species
AT4G16150 No alias calmodulin binding;transcription regulators 0.03 OrthoFinder output from all 47 species
Adi_g022445 No alias CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0008.g011346 CAMTA3, SR1 CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.24G013800.1 CAMTA3, SR1,... CAMTA-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
LOC_Os01g69910.1 LOC_Os01g69910 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
LOC_Os04g31900.1 LOC_Os04g31900 transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species
Nbi_g09186 CAMTA3, SR1 CAMTA-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e016983_P001 EICBP.B, CAMTA1,... transcription factor (CAMTA) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 773 791
IPR000048 IQ_motif_EF-hand-BS 796 815
IPR020683 DUF3447 557 637
IPR005559 CG-1_dom 32 149
No external refs found!