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Aliases : EMB2750, Solyc12g098990
Description : Pentatricopeptide repeat-containing protein At3g06430, chloroplastic OS=Arabidopsis thaliana (sp|q9squ6|pp216_arath : 635.0)
Gene families : OG0002119 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002119_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00045p00075400 | EMB2750,... | Pentatricopeptide repeat-containing protein At3g06430,... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G06430 | EMB2750 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | OrthoFinder output from all 47 species | |
| AT3G53170 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.01 | OrthoFinder output from all 47 species | |
| AT4G39620 | EMB2453, ATPPR5 | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.09 | OrthoFinder output from all 47 species | |
| AT5G48730 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | OrthoFinder output from all 47 species | |
| Als_g33753 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g01190 | EMB2453, ATPPR5 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g08087 | EMB2453, ATPPR5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01017677001 | EMB2750 | Pentatricopeptide repeat-containing protein At3g06430,... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01022204001 | EMB2453, ATPPR5 | Pentatricopeptide repeat-containing protein At4g39620,... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_00230 | No alias | Pentatricopeptide repeat-containing protein At3g06430,... | 0.07 | OrthoFinder output from all 47 species | |
| Gb_36199 | EMB2453, ATPPR5 | Pentatricopeptide repeat-containing protein At4g39620,... | 0.06 | OrthoFinder output from all 47 species | |
| Gb_37344 | No alias | Pentatricopeptide repeat-containing protein At5g48730,... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_38049 | No alias | Pentatricopeptide repeat-containing protein At3g53170... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g02430.1 | LOC_Os03g02430 | Pentatricopeptide repeat-containing protein At3g53170... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os06g07550.1 | LOC_Os06g07550 | Pentatricopeptide repeat-containing protein At5g48730,... | 0.04 | OrthoFinder output from all 47 species | |
| Lfl_g18972 | EMB2453, ATPPR5 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| MA_12518g0010 | EMB2453, ATPPR5 | Pentatricopeptide repeat-containing protein PPR5... | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g02451 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g09304 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g11535 | EMB2453, ATPPR5 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0066.g016075 | No alias | not classified & original description: CDS=33-1412 | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e023883_P001 | EMB2453, ATPPR5,... | Pentatricopeptide repeat-containing protein PPR5,... | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e031052_P001 | Zm00001e031052 | Pentatricopeptide repeat-containing protein At5g48730,... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e032726_P001 | EMB2750, Zm00001e032726 | Pentatricopeptide repeat-containing protein At3g06430,... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
| MF | GO:0004392 | heme oxygenase (decyclizing) activity | IEP | HCCA |
| MF | GO:0004497 | monooxygenase activity | IEP | HCCA |
| MF | GO:0004784 | superoxide dismutase activity | IEP | HCCA |
| BP | GO:0006778 | porphyrin-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006788 | heme oxidation | IEP | HCCA |
| BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
| MF | GO:0008237 | metallopeptidase activity | IEP | HCCA |
| CC | GO:0009507 | chloroplast | IEP | HCCA |
| CC | GO:0009536 | plastid | IEP | HCCA |
| MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
| MF | GO:0016670 | oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor | IEP | HCCA |
| MF | GO:0016712 | oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen | IEP | HCCA |
| MF | GO:0016721 | oxidoreductase activity, acting on superoxide radicals as acceptor | IEP | HCCA |
| MF | GO:0016972 | thiol oxidase activity | IEP | HCCA |
| BP | GO:0033013 | tetrapyrrole metabolic process | IEP | HCCA |
| BP | GO:0042168 | heme metabolic process | IEP | HCCA |
| BP | GO:0042440 | pigment metabolic process | IEP | HCCA |
| BP | GO:0055114 | obsolete oxidation-reduction process | IEP | HCCA |
| BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
| No external refs found! |