Aliases : Solyc12g098700
Description : RNA helicase (Prp5)
Gene families : OG0003781 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003781_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00136p00027550 | evm_27.TU.AmTr_v1... | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
AT1G20920 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.09 | OrthoFinder output from all 47 species | |
AT3G09620 | No alias | P-loop containing nucleoside triphosphate hydrolases... | 0.04 | OrthoFinder output from all 47 species | |
Ala_g15868 | No alias | RNA helicase *(RCF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Als_g28448 | No alias | RNA helicase *(RCF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Azfi_s0051.g031460 | No alias | RNA helicase *(RCF1) & original description: CDS=143-4114 | 0.02 | OrthoFinder output from all 47 species | |
Ceric.37G065700.1 | Ceric.37G065700 | RNA helicase *(RCF1) & original description:... | 0.09 | OrthoFinder output from all 47 species | |
Cre16.g676400 | No alias | RNA processing.RNA splicing.spliceosome... | 0.02 | OrthoFinder output from all 47 species | |
GSVIVT01023849001 | No alias | DEAD-box ATP-dependent RNA helicase 45 OS=Arabidopsis thaliana | 0.1 | OrthoFinder output from all 47 species | |
Gb_03798 | No alias | RNA helicase (Prp5) | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g16955 | No alias | RNA helicase *(RCF1) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
MA_175476g0010 | No alias | RNA helicase (Prp5) | 0.03 | OrthoFinder output from all 47 species | |
Mp1g06750.1 | No alias | RNA helicase (Prp5) | 0.12 | OrthoFinder output from all 47 species | |
Ore_g10272 | No alias | RNA helicase *(RCF1) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Sam_g52675 | No alias | RNA helicase *(RCF1) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo6590 | No alias | DEAD-box ATP-dependent RNA helicase 42 OS=Oryza sativa... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e040204_P001 | Zm00001e040204 | RNA helicase (Prp5) | 0.05 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
MF | GO:0005524 | ATP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
MF | GO:0003682 | chromatin binding | IEP | HCCA |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0006396 | RNA processing | IEP | HCCA |
BP | GO:0006397 | mRNA processing | IEP | HCCA |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
BP | GO:0008380 | RNA splicing | IEP | HCCA |
BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
No external refs found! |