1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g096980.3.1

Solyc12g096980.3.1 (IAA13, Solyc12g096980)


Aliases : IAA13, Solyc12g096980

Description : Auxin-responsive protein IAA12 OS=Arabidopsis thaliana (sp|q38830|iaa12_arath : 180.0)


Gene families : OG0000146 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000146_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g096980.3.1
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AT1G04550 IAA12, BDL AUX/IAA transcriptional regulator family protein 0.04 OrthoFinder output from all 47 species
AT1G15580 ATAUX2-27, AUX2-27, IAA5 indole-3-acetic acid inducible 5 0.06 OrthoFinder output from all 47 species
AT2G33310 IAA13 auxin-induced protein 13 0.02 OrthoFinder output from all 47 species
AT3G04730 IAA16 indoleacetic acid-induced protein 16 0.03 OrthoFinder output from all 47 species
AT3G15540 MSG2, IAA19 indole-3-acetic acid inducible 19 0.05 OrthoFinder output from all 47 species
AT3G23030 IAA2 indole-3-acetic acid inducible 2 0.02 OrthoFinder output from all 47 species
AT4G14550 SLR, IAA14 indole-3-acetic acid inducible 14 0.03 OrthoFinder output from all 47 species
AT4G14560 IAA1, AXR5 indole-3-acetic acid inducible 0.04 OrthoFinder output from all 47 species
AT4G28640 IAA11 indole-3-acetic acid inducible 11 0.07 OrthoFinder output from all 47 species
AT4G32280 IAA29 indole-3-acetic acid inducible 29 0.08 OrthoFinder output from all 47 species
AT5G43700 IAA4, ATAUX2-11 AUX/IAA transcriptional regulator family protein 0.03 OrthoFinder output from all 47 species
Adi_g014926 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g059235 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06123 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.01 OrthoFinder output from all 47 species
Aev_g07239 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09269 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06542 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07791 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08495 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40789 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g45911 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02279 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g08219 AXR2, IAA7 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13884 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g31358 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g58273 AXR3, IAA17 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0007.g011027 SLR, IAA14 transcriptional repressor *(IAA/AUX) & original... 0.01 OrthoFinder output from all 47 species
Cba_g11987 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G028900.1 IAA12, BDL,... transcriptional repressor *(IAA/AUX) & original... 0.07 OrthoFinder output from all 47 species
Ceric.12G029200.1 IAA8, Ceric.12G029200 transcriptional repressor *(IAA/AUX) & original... 0.03 OrthoFinder output from all 47 species
Ceric.29G020600.1 IAA8, Ceric.29G020600 transcriptional repressor *(IAA/AUX) & original... 0.03 OrthoFinder output from all 47 species
Dde_g11562 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19267 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38180 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02643 IAA2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05406 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05726 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08365 IAA11 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16016 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015350001 IAA27, PAP2 Auxin-responsive protein IAA27 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01017158001 MSG2, IAA19 Auxin-induced protein AUX22 OS=Glycine max 0.02 OrthoFinder output from all 47 species
GSVIVT01017711001 IAA31 Auxin-responsive protein IAA4 OS=Oryza sativa subsp. indica 0.03 OrthoFinder output from all 47 species
GSVIVT01018101001 AXR2, IAA7 Auxin-responsive protein IAA7 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036283001 AXR2, IAA7 Auxin-induced protein AUX28 OS=Glycine max 0.03 OrthoFinder output from all 47 species
LOC_Os01g08320.1 AXR3, IAA17,... Auxin-responsive protein IAA1 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
LOC_Os01g18360.1 IAA31, LOC_Os01g18360 Auxin-responsive protein IAA4 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
LOC_Os03g43410.1 IAA4, ATAUX2-11,... Auxin-responsive protein IAA12 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os03g58350.1 IAA3, SHY2,... Auxin-responsive protein IAA14 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os06g07040.1 IAA31, LOC_Os06g07040 Auxin-responsive protein IAA20 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os09g35870.1 AXR3, IAA17,... Auxin-responsive protein IAA26 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
LOC_Os12g40890.1 IAA16, LOC_Os12g40890 Auxin-responsive protein IAA30 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
LOC_Os12g40900.1 IAA4, ATAUX2-11,... Auxin-responsive protein IAA31 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Len_g16330 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g21006 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431605g0010 IAA12, BDL no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_14280g0010 IAA13 Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
MA_62134g0010 IAA27, PAP2 Auxin-induced protein AUX28 OS=Glycine max... 0.02 OrthoFinder output from all 47 species
MA_84793g0010 IAA13 Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_94744g0010 IAA13 Auxin-responsive protein IAA13 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g14922 SLR, IAA14 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g15924 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26891 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g09678 IAA3, SHY2 transcriptional repressor *(IAA/AUX) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g17808 IAA16 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g41677 AXR3, IAA17 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g31507 IAA27, PAP2 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Smo85035 IAA16 Auxin-responsive protein IAA30 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Solyc03g121060.4.1 PAP1, IAA26,... repressor component Aux/IAA of auxin receptor complex 0.03 OrthoFinder output from all 47 species
Solyc06g066020.3.1 IAA29, Solyc06g066020 Auxin-responsive protein IAA29 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g065850.4.1 IAA4, ATAUX2-11,... Auxin-induced protein 22D OS=Vigna radiata var. radiata... 0.04 OrthoFinder output from all 47 species
Spa_g05340 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g13129 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17022 IAA13 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g21406 IAA8 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g40117 IAA12, BDL transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g31611 IAA9 transcriptional repressor *(IAA/AUX) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e005073_P001 IAA3, SHY2,... Auxin-responsive protein IAA12 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Zm00001e032398_P001 IAA8, Zm00001e032398 Auxin-responsive protein IAA19 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006595 polyamine metabolic process IEP HCCA
BP GO:0006596 polyamine biosynthetic process IEP HCCA
BP GO:0006597 spermine biosynthetic process IEP HCCA
BP GO:0008215 spermine metabolic process IEP HCCA
BP GO:0008216 spermidine metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0008295 spermidine biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 63 232
No external refs found!