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  5. Solyc12g096750.2.1

Solyc12g096750.2.1 (Solyc12g096750)


Aliases : Solyc12g096750

Description : Polygalacturonase OS=Prunus persica (sp|p48979|pglr_prupe : 461.0) & Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase(50.3.2 : 242.8)


Gene families : OG0008809 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008809_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g096750.2.1
Cluster HCCA: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00031370 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.03 OrthoFinder output from all 47 species
AMTR_s00066p00135670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 OrthoFinder output from all 47 species
AMTR_s00074p00182020 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s04606p00004600 evm_27.TU.AmTr_v1... Polygalacturonase OS=Prunus persica 0.03 OrthoFinder output from all 47 species
AT1G05650 No alias Pectin lyase-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G05660 No alias Pectin lyase-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G43870 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G43880 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G43890 No alias Pectin lyase-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G59850 No alias Pectin lyase-like superfamily protein 0.02 OrthoFinder output from all 47 species
GSVIVT01038241001 No alias Polygalacturonase OS=Prunus persica 0.03 OrthoFinder output from all 47 species
LOC_Os01g43490.1 LOC_Os01g43490 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
LOC_Os01g66710.1 LOC_Os01g66710 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
LOC_Os11g14410.1 LOC_Os11g14410 Polygalacturonase OS=Prunus persica... 0.02 OrthoFinder output from all 47 species
Solyc08g014540.1.1 Solyc08g014540 Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
Solyc12g019120.2.1 Solyc12g019120 Polygalacturonase OS=Prunus persica... 0.03 OrthoFinder output from all 47 species
Solyc12g019220.1.1 Solyc12g019220 Polygalacturonase OS=Prunus persica... 0.05 OrthoFinder output from all 47 species
Zm00001e019002_P001 Zm00001e019002 Polygalacturonase OS=Prunus persica... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016151 nickel cation binding IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016846 carbon-sulfur lyase activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 49 374
No external refs found!