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  5. Solyc12g094420.2.1

Solyc12g094420.2.1 (MSL6, Solyc12g094420)


Aliases : MSL6, Solyc12g094420

Description : mechanosensitive ion channel (MSL)


Gene families : OG0000689 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000689_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g094420.2.1
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT1G78610 MSL6 mechanosensitive channel of small conductance-like 6 0.01 OrthoFinder output from all 47 species
Dac_g12993 MSL6 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007089 MSL4 mechanosensitive ion channel *(MSL) & original... 0.03 OrthoFinder output from all 47 species
Spa_g10135 MSL5 mechanosensitive ion channel *(MSL) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023205_P004 MSL5, Zm00001e023205 mechanosensitive ion channel (MSL) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0010011 auxin binding IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0031072 heat shock protein binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0042562 hormone binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR006685 MscS_channel 520 725
No external refs found!