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  5. Solyc12g088990.2.1

Solyc12g088990.2.1 (SEC3A, Solyc12g088990)


Aliases : SEC3A, Solyc12g088990

Description : component SEC3 of Exocyst complex


Gene families : OG0003449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088990.2.1

Target Alias Description ECC score Gene Family Method Actions
AT1G47550 SEC3A exocyst complex component sec3A 0.05 OrthoFinder output from all 47 species
Aev_g07970 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g09800 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.06 OrthoFinder output from all 47 species
Als_g03216 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g09078 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0138.g051114 SEC3A component *(SEC3) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Cba_g14077 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.1Z003000.1 SEC3A, Ceric.1Z003000 component *(SEC3) of Exocyst complex & original... 0.05 OrthoFinder output from all 47 species
Ceric.31G058500.1 SEC3A, Ceric.31G058500 component *(SEC3) of Exocyst complex & original... 0.07 OrthoFinder output from all 47 species
Dcu_g07726 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.13 OrthoFinder output from all 47 species
GSVIVT01009623001 SEC3A Vesicle trafficking.target membrane tethering.Exocyst... 0.15 OrthoFinder output from all 47 species
LOC_Os03g42750.1 SEC3A, LOC_Os03g42750 component SEC3 of Exocyst complex 0.21 OrthoFinder output from all 47 species
Len_g16136 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g03342 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.08 OrthoFinder output from all 47 species
MA_10433627g0010 SEC3A component SEC3 of Exocyst complex 0.02 OrthoFinder output from all 47 species
MA_203056g0010 SEC3A component SEC3 of Exocyst complex 0.02 OrthoFinder output from all 47 species
Mp8g07200.1 SEC3A component SEC3 of Exocyst complex 0.08 OrthoFinder output from all 47 species
Nbi_g01328 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g06314 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56466 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g01338 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004224 SEC3A component *(SEC3) of Exocyst complex & original... 0.03 OrthoFinder output from all 47 species
Smo440749 SEC3A Vesicle trafficking.target membrane tethering.Exocyst... 0.1 OrthoFinder output from all 47 species
Tin_g05219 SEC3A component *(SEC3) of Exocyst complex & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e005089_P001 SEC3A, Zm00001e005089 component SEC3 of Exocyst complex 0.21 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEA Interproscan
BP GO:0006887 exocytosis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004470 malic enzyme activity IEP HCCA
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006904 vesicle docking involved in exocytosis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016615 malate dehydrogenase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022406 membrane docking IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030126 COPI vesicle coat IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048278 vesicle docking IEP HCCA
BP GO:0051640 organelle localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:0140029 exocytic process IEP HCCA
BP GO:0140056 organelle localization by membrane tethering IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR028258 Sec3-PIP2_bind 51 145
IPR019160 Sec3_C 225 485
IPR019160 Sec3_C 577 871
No external refs found!