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  5. Solyc12g062840.1.1

Solyc12g062840.1.1 (Solyc12g062840)


Aliases : Solyc12g062840

Description : no hits & (original description: none)


Gene families : OG0001460 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001460_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g062840.1.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00157920 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00058p00201770 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G01516 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
AT5G14690 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from all 47 species
Als_g03594 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g21205 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g18047 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g45160.1 LOC_Os01g45160 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g46432 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g12494 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000205 No alias not classified & original description: CDS=1-732 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000245 No alias A1-class (Pepsin) protease & original description: CDS=1-621 0.04 OrthoFinder output from all 47 species
Sam_g25716 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!