1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g056850.2.1

Solyc12g056850.2.1 (Solyc12g056850)


Aliases : Solyc12g056850

Description : no hits & (original description: none)


Gene families : OG0007713 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007713_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056850.2.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT1G77930 No alias Chaperone DnaJ-domain superfamily protein 0.09 OrthoFinder output from all 47 species
Adi_g053880 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g43304 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13093 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10436 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g07875 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g12711 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02042 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
LOC_Os07g43330.1 LOC_Os07g43330 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g13379 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g07385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60447 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g05869 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g09531 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14518 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e035597_P001 Zm00001e035597 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0046838 phosphorylated carbohydrate dephosphorylation IEP HCCA
BP GO:0046855 inositol phosphate dephosphorylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071545 inositol phosphate catabolic process IEP HCCA
MF GO:0071949 FAD binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001623 DnaJ_domain 86 153
No external refs found!