Solyc12g056730.1.1 (Solyc12g056730)

Aliases : Solyc12g056730

Description : RGF-peptide receptor (RGFR). protein kinase (LRR-XI)

Gene families : OG0001197 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001197_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g056730.1.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00078p00159290	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.TKL kinase...	0.03	OrthoFinder output from all 47 species
AMTR_s00120p00096470	evm_27.TU.AmTr_v1...	Protein modification.phosphorylation.TKL kinase...	0.03	OrthoFinder output from all 47 species
AT1G34110	No alias	Leucine-rich receptor-like protein kinase family protein	0.03	OrthoFinder output from all 47 species
AT3G24240	No alias	Leucine-rich repeat receptor-like protein kinase family protein	0.03	OrthoFinder output from all 47 species
AT4G26540	No alias	Leucine-rich repeat receptor-like protein kinase family protein	0.04	OrthoFinder output from all 47 species
Adi_g054890	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Adi_g080169	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Adi_g102156	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aev_g38626	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Als_g14707	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Als_g52070	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aob_g28231	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Aop_g63584	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Aspi01Gene62383.t1	Aspi01Gene62383	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Azfi_s0024.g020447	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Azfi_s0090.g042802	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.06	OrthoFinder output from all 47 species
Ceric.12G042100.1	Ceric.12G042100	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Dac_g34799	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Dde_g11355	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.04	OrthoFinder output from all 47 species
Dde_g26611	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
LOC_Os04g04330.1	LOC_Os04g04330	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.05	OrthoFinder output from all 47 species
LOC_Os06g38990.1	LOC_Os06g38990	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.07	OrthoFinder output from all 47 species
LOC_Os08g38560.1	LOC_Os08g38560	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.02	OrthoFinder output from all 47 species
Len_g02922	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Mp3g08340.1	No alias	protein kinase (LRR-XI)	0.02	OrthoFinder output from all 47 species
Mp7g18820.1	No alias	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.03	OrthoFinder output from all 47 species
Msp_g25899	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Nbi_g10132	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Pnu_g20080	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Ppi_g17519	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0158.g023762	No alias	EC_2.7 transferase transferring phosphorus-containing...	0.03	OrthoFinder output from all 47 species
Solyc09g061940.3.1	Solyc09g061940	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.05	OrthoFinder output from all 47 species
Zm00001e010033_P001	Zm00001e010033	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.04	OrthoFinder output from all 47 species
Zm00001e024342_P001	Zm00001e024342	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.05	OrthoFinder output from all 47 species
Zm00001e025874_P002	Zm00001e025874	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.02	OrthoFinder output from all 47 species
Zm00001e031211_P001	Zm00001e031211	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.07	OrthoFinder output from all 47 species
Zm00001e034471_P001	Zm00001e034471	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.08	OrthoFinder output from all 47 species
Zm00001e040564_P001	Zm00001e040564	RGF-peptide receptor (RGFR). protein kinase (LRR-XI)	0.05	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	Interproscan
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006468	protein phosphorylation	IEA	Interproscan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0004014	adenosylmethionine decarboxylase activity	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006576	biogenic amine metabolic process	IEP	HCCA
BP	GO:0006595	polyamine metabolic process	IEP	HCCA
BP	GO:0006596	polyamine biosynthetic process	IEP	HCCA
BP	GO:0006597	spermine biosynthetic process	IEP	HCCA
BP	GO:0008215	spermine metabolic process	IEP	HCCA
BP	GO:0008216	spermidine metabolic process	IEP	HCCA
BP	GO:0008295	spermidine biosynthetic process	IEP	HCCA
BP	GO:0009308	amine metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016830	carbon-carbon lyase activity	IEP	HCCA
MF	GO:0016831	carboxy-lyase activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
BP	GO:0050789	regulation of biological process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0065007	biological regulation	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013210	LRR_N_plant-typ	27	71
IPR001611	Leu-rich_rpt	533	555
IPR000719	Prot_kinase_dom	783	1050
IPR001611	Leu-rich_rpt	100	159
IPR001611	Leu-rich_rpt	388	448

External Links

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Solyc12g056730.1.1 (Solyc12g056730)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation