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  5. Solyc12g044390.3.1

Solyc12g044390.3.1 (TINY2, Solyc12g044390)


Aliases : TINY2, Solyc12g044390

Description : transcription factor (DREB)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g044390.3.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00264660 ATERF3, ERF3,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00007p00268280 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
AMTR_s00021p00184450 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AMTR_s00095p00096190 CBF4, DREB1D,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 OrthoFinder output from all 47 species
AT1G24590 DRN-LIKE, ESR2,... DORNROSCHEN-like 0.04 OrthoFinder output from all 47 species
AT5G51990 CBF4, DREB1D C-repeat-binding factor 4 0.04 OrthoFinder output from all 47 species
Ala_g14492 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g02687 ERF7, ATERF7, ATERF-7 subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Gb_08541 No alias transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Gb_32806 DREB2A, DREB2 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08470.1 RAP2.12, LOC_Os03g08470 Ethylene-responsive transcription factor 1 OS=Oryza... 0.03 OrthoFinder output from all 47 species
LOC_Os06g03670.1 DREB1A, ATCBF3,... transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Len_g01640 DEAR4, RAP2.10 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17161 ATERF12, ERF12 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g23562 ERF-1, ATERF-1 subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g006320.1.1 ATERF4, RAP2.5,... transcription factor (ERF) 0.04 OrthoFinder output from all 47 species
Solyc12g038440.1.1 HRE2, Solyc12g038440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e003579_P001 Zm00001e003579 Ethylene-responsive transcription factor ERF015... 0.02 OrthoFinder output from all 47 species
Zm00001e015219_P001 Zm00001e015219 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species
Zm00001e023157_P001 Zm00001e023157 transcription factor (DREB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 28 78
No external refs found!