Aliases : Solyc12g043000
Description : subunit beta2 of coat protein complex
Gene families : OG0002111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002111_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00142p00013680 | evm_27.TU.AmTr_v1... | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.11 | OrthoFinder output from all 47 species | |
AT1G79990 | No alias | structural molecules | 0.18 | OrthoFinder output from all 47 species | |
AT3G15980 | No alias | Coatomer, beta' subunit | 0.18 | OrthoFinder output from all 47 species | |
Adi_g015312 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Adi_g088099 | No alias | subunit beta2 of coat protein complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Aev_g13025 | No alias | subunit beta2 of coat protein complex & original... | 0.08 | OrthoFinder output from all 47 species | |
Ala_g02602 | No alias | subunit beta2 of coat protein complex & original... | 0.08 | OrthoFinder output from all 47 species | |
Als_g04780 | No alias | not classified & original description: none | 0.08 | OrthoFinder output from all 47 species | |
Als_g23306 | No alias | subunit beta2 of coat protein complex & original... | 0.08 | OrthoFinder output from all 47 species | |
Als_g23307 | No alias | subunit beta2 of coat protein complex & original... | 0.06 | OrthoFinder output from all 47 species | |
Aob_g06720 | No alias | subunit beta2 of coat protein complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g12571 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000608 | No alias | subunit beta2 of coat protein complex & original... | 0.11 | OrthoFinder output from all 47 species | |
Azfi_s0038.g026263 | No alias | subunit beta2 of coat protein complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Cba_g14578 | No alias | subunit beta2 of coat protein complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Cba_g32368 | No alias | subunit beta2 of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g36928 | No alias | subunit beta2 of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g71110 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.30G060200.1 | Ceric.30G060200 | subunit beta2 of coat protein complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Cpa|evm.model.tig00020903.33 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.06 | OrthoFinder output from all 47 species | |
Cre02.g118500 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.09 | OrthoFinder output from all 47 species | |
Dac_g05778 | No alias | subunit beta2 of coat protein complex & original... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g04083 | No alias | subunit beta2 of coat protein complex & original... | 0.2 | OrthoFinder output from all 47 species | |
Dde_g02366 | No alias | subunit beta2 of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Ehy_g02910 | No alias | subunit beta2 of coat protein complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g08641 | No alias | subunit beta2 of coat protein complex & original... | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01017121001 | No alias | Vesicle trafficking.Coat protein I (COPI) coatomer... | 0.12 | OrthoFinder output from all 47 species | |
Gb_26317 | No alias | subunit beta2 of coat protein complex | 0.1 | OrthoFinder output from all 47 species | |
LOC_Os02g11830.2 | LOC_Os02g11830 | subunit beta2 of coat protein complex | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os02g11840.1 | LOC_Os02g11840 | subunit beta2 of coat protein complex | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os06g05180.3 | LOC_Os06g05180 | Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica... | 0.18 | OrthoFinder output from all 47 species | |
Len_g12266 | No alias | subunit beta2 of coat protein complex & original... | 0.09 | OrthoFinder output from all 47 species | |
Len_g46090 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Len_g57302 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g05710 | No alias | subunit beta2 of coat protein complex & original... | 0.13 | OrthoFinder output from all 47 species | |
MA_10433989g0020 | No alias | Coatomer subunit beta-2 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
MA_10436677g0010 | No alias | Coatomer subunit beta-3 OS=Arabidopsis thaliana... | 0.06 | OrthoFinder output from all 47 species | |
MA_10436836g0020 | No alias | Coatomer subunit beta-1 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
MA_10436968g0010 | No alias | peroxisomal polyamine oxidase (PAO2/3/4). subunit beta2... | 0.07 | OrthoFinder output from all 47 species | |
Mp3g04060.1 | No alias | subunit beta2 of coat protein complex | 0.15 | OrthoFinder output from all 47 species | |
Msp_g01672 | No alias | subunit beta2 of coat protein complex & original... | 0.06 | OrthoFinder output from all 47 species | |
Nbi_g07405 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Ore_g10228 | No alias | subunit beta2 of coat protein complex & original... | 0.08 | OrthoFinder output from all 47 species | |
Pir_g14528 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Pp3c14_8280V3.1 | Pp3c14_8280 | Coatomer, beta\ subunit | 0.01 | OrthoFinder output from all 47 species | |
Ppi_g01343 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0058.g014985 | No alias | subunit beta2 of coat protein complex & original... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g08319 | No alias | subunit beta2 of coat protein complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Spa_g10496 | No alias | subunit beta2 of coat protein complex & original... | 0.09 | OrthoFinder output from all 47 species | |
Spa_g17544 | No alias | subunit beta2 of coat protein complex & original... | 0.07 | OrthoFinder output from all 47 species | |
Spa_g50190 | No alias | subunit beta2 of coat protein complex & original... | 0.02 | OrthoFinder output from all 47 species | |
Tin_g02168 | No alias | subunit beta2 of coat protein complex & original... | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e014494_P001 | Zm00001e014494 | subunit beta2 of coat protein complex | 0.28 | OrthoFinder output from all 47 species | |
Zm00001e024969_P001 | Zm00001e024969 | subunit beta2 of coat protein complex | 0.27 | OrthoFinder output from all 47 species | |
Zm00001e030001_P002 | Zm00001e030001 | subunit beta2 of coat protein complex | 0.24 | OrthoFinder output from all 47 species | |
Zm00001e036524_P002 | Zm00001e036524 | subunit beta2 of coat protein complex | 0.06 | OrthoFinder output from all 47 species | |
Zm00001e037375_P002 | Zm00001e037375 | subunit beta2 of coat protein complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005198 | structural molecule activity | IEA | Interproscan |
MF | GO:0005515 | protein binding | IEA | Interproscan |
BP | GO:0006886 | intracellular protein transport | IEA | Interproscan |
BP | GO:0016192 | vesicle-mediated transport | IEA | Interproscan |
CC | GO:0030117 | membrane coat | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000062 | fatty-acyl-CoA binding | IEP | HCCA |
CC | GO:0000145 | exocyst | IEP | HCCA |
CC | GO:0005801 | cis-Golgi network | IEP | HCCA |
BP | GO:0006887 | exocytosis | IEP | HCCA |
BP | GO:0006891 | intra-Golgi vesicle-mediated transport | IEP | HCCA |
BP | GO:0006904 | vesicle docking involved in exocytosis | IEP | HCCA |
BP | GO:0009966 | regulation of signal transduction | IEP | HCCA |
BP | GO:0010646 | regulation of cell communication | IEP | HCCA |
BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
CC | GO:0017119 | Golgi transport complex | IEP | HCCA |
BP | GO:0022406 | membrane docking | IEP | HCCA |
BP | GO:0023051 | regulation of signaling | IEP | HCCA |
CC | GO:0030118 | clathrin coat | IEP | HCCA |
CC | GO:0030120 | vesicle coat | IEP | HCCA |
CC | GO:0030125 | clathrin vesicle coat | IEP | HCCA |
CC | GO:0030126 | COPI vesicle coat | IEP | HCCA |
CC | GO:0030130 | clathrin coat of trans-Golgi network vesicle | IEP | HCCA |
CC | GO:0030132 | clathrin coat of coated pit | IEP | HCCA |
BP | GO:0032012 | regulation of ARF protein signal transduction | IEP | HCCA |
BP | GO:0032940 | secretion by cell | IEP | HCCA |
MF | GO:0033218 | amide binding | IEP | HCCA |
BP | GO:0046578 | regulation of Ras protein signal transduction | IEP | HCCA |
BP | GO:0046903 | secretion | IEP | HCCA |
BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
BP | GO:0048278 | vesicle docking | IEP | HCCA |
BP | GO:0048583 | regulation of response to stimulus | IEP | HCCA |
BP | GO:0051056 | regulation of small GTPase mediated signal transduction | IEP | HCCA |
BP | GO:0051640 | organelle localization | IEP | HCCA |
BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
CC | GO:0099023 | vesicle tethering complex | IEP | HCCA |
MF | GO:0120227 | acyl-CoA binding | IEP | HCCA |
BP | GO:0140029 | exocytic process | IEP | HCCA |
BP | GO:0140056 | organelle localization by membrane tethering | IEP | HCCA |
BP | GO:0140352 | export from cell | IEP | HCCA |
MF | GO:1901567 | fatty acid derivative binding | IEP | HCCA |
MF | GO:1901681 | sulfur compound binding | IEP | HCCA |
BP | GO:1902531 | regulation of intracellular signal transduction | IEP | HCCA |
No external refs found! |