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  5. Solyc12g033000.1.1

Solyc12g033000.1.1 (PSAB, Solyc12g033000)


Aliases : PSAB, Solyc12g033000

Description : Photosystem I P700 chlorophyll a apoprotein A2 OS=Sorghum bicolor (sp|a1e9s3|psab_sorbi : 146.0)


Gene families : OG0001111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g033000.1.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
ATCG00340 PSAB Photosystem I, PsaA/PsaB protein 0.02 OrthoFinder output from all 47 species
ATCG00350 PSAA Photosystem I, PsaA/PsaB protein 0.03 OrthoFinder output from all 47 species
Als_g27956 PSAB not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07701 PSAA apoprotein PsaA of PS-I complex & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g16004 PSAB apoprotein PsaB of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G013300.1 PSAA, Ceric.02G013300 not classified & original description: pacid=50585842... 0.04 OrthoFinder output from all 47 species
Ceric.02G015700.1 PSAB, Ceric.02G015700 not classified & original description: pacid=50585896... 0.04 OrthoFinder output from all 47 species
Ceric.09G047700.1 PSAB, Ceric.09G047700 apoprotein PsaB of PS-I complex & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.09G047800.1 PSAA, Ceric.09G047800 apoprotein PsaA of PS-I complex & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.23G081400.1 PSAB, Ceric.23G081400 not classified & original description: pacid=50610997... 0.03 OrthoFinder output from all 47 species
Ceric.31G008700.1 PSAA, Ceric.31G008700 not classified & original description: pacid=50575048... 0.06 OrthoFinder output from all 47 species
Ceric.32G035400.1 PSAB, Ceric.32G035400 not classified & original description: pacid=50597300... 0.06 OrthoFinder output from all 47 species
Gb_09026 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.08 OrthoFinder output from all 47 species
Gb_41658 No alias Photosystem I P700 chlorophyll a apoprotein A1... 0.04 OrthoFinder output from all 47 species
LOC_Os01g57962.1 PSAB, LOC_Os01g57962 apoprotein PsaB of PS-I complex 0.07 OrthoFinder output from all 47 species
LOC_Os01g57964.1 PSAA, LOC_Os01g57964 apoprotein PsaA of PS-I complex 0.05 OrthoFinder output from all 47 species
LOC_Os04g16760.1 PSAA, LOC_Os04g16760 apoprotein PsaA of PS-I complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g01675.1 PSAA, LOC_Os05g01675 apoprotein PsaA of PS-I complex 0.04 OrthoFinder output from all 47 species
LOC_Os10g21248.1 PSAB, LOC_Os10g21248 apoprotein PsaB of PS-I complex 0.04 OrthoFinder output from all 47 species
LOC_Os10g21250.1 PSAA, LOC_Os10g21250 apoprotein PsaA of PS-I complex 0.03 OrthoFinder output from all 47 species
LOC_Os10g38229.1 PSAA, LOC_Os10g38229 apoprotein PsaA of PS-I complex 0.05 OrthoFinder output from all 47 species
LOC_Os10g38234.1 PSAB, LOC_Os10g38234 apoprotein PsaB of PS-I complex 0.04 OrthoFinder output from all 47 species
Mp1g07160.1 PSAB Photosystem I P700 chlorophyll a apoprotein A2... 0.03 OrthoFinder output from all 47 species
Mp1g16220.1 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.03 OrthoFinder output from all 47 species
Mp3g20630.1 PSAA Photosystem I P700 chlorophyll a apoprotein A1... 0.03 OrthoFinder output from all 47 species
Ore_g01818 PSAA apoprotein PsaA of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g09869 PSAB apoprotein PsaB of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002247 PSAB not classified & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0528.g027465 PSAB component *(uS14c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Sam_g01756 No alias apoprotein PsaB of PS-I complex & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g14789 No alias apoprotein PsaA of PS-I complex & original description: none 0.03 OrthoFinder output from all 47 species
Solyc00g500056.1.1 PSAB, Solyc00g500056 apoprotein PsaB of PS-I complex 0.04 OrthoFinder output from all 47 species
Solyc00g500057.1.1 PSAA, Solyc00g500057 apoprotein PsaA of PS-I complex 0.04 OrthoFinder output from all 47 species
Solyc00g500138.1.1 PSAB, Solyc00g500138 apoprotein PsaB of PS-I complex 0.04 OrthoFinder output from all 47 species
Solyc00g500208.1.1 PSAB, Solyc00g500208 apoprotein PsaB of PS-I complex 0.04 OrthoFinder output from all 47 species
Solyc00g500209.1.1 PSAA, Solyc00g500209 apoprotein PsaA of PS-I complex 0.04 OrthoFinder output from all 47 species
Solyc06g009940.1.1 PSAA, Solyc06g009940 Photosystem I P700 chlorophyll a apoprotein A1 OS=Morus... 0.04 OrthoFinder output from all 47 species
Tin_g03556 PSAA apoprotein PsaA of PS-I complex & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009579 thylakoid IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 1 79
No external refs found!